RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 AOC1P19801 751 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 GNL1P36915 607 aaPredicted RBP16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 ABCG1P45844 678 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 SARNPP82979 210 aaKnown RBP16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 NOTUMQ6P988 496 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 TLK2Q86UE8 772 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 CCDC185Q8N715 623 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 MOCS1Q9NZB8 636 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 FLRT1Q9NZU1 646 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 ADAMTS6Q9UKP5 1117 aa16.71■□□□□ 0.26
NKX3-1-201ENST00000380871 SCN1AP35498 2009 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 L1CAMP32004 1257 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 SFT2D3Q587I9 215 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 CTU1Q7Z7A3 348 aaKnown RBP16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 PHTF2Q8N3S3 785 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 MCUQ8NE86 351 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 SORT1Q99523 831 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 XPNPEP3Q9NQH7 507 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 DDX43Q9NXZ2 648 aaKnown RBP16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 MAGED2Q9UNF1 606 aaPredicted RBP16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 IQCA1LA6NCM1 817 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 MEIS3P2A8K0S8 358 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 MGAT1P26572 445 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 CCNIQ14094 377 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 CMC1Q7Z7K0 106 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 WDR75Q8IWA0 830 aaKnown RBP16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 TNS4Q8IZW8 715 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 C2orf69Q8N8R5 385 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 ADAMTS10Q9H324 1103 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 DTLQ9NZJ0 730 aa16.7■□□□□ 0.26
NKX3-1-201ENST00000380871 BIRC5O15392 142 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 PEX2P28328 305 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 CRABP2P29373 138 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 RAB27AP51159 221 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 ROR2Q01974 943 aaKnown RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 SOX4Q06945 474 aaPredicted RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 BIRC2Q13490 618 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 CFAP157Q5JU67 520 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 EFHC1Q5JVL4 640 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 PACS1Q6VY07 963 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 HPS6Q86YV9 775 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 GBP5Q96PP8 586 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 FRMD8Q9BZ67 464 aaPredicted RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 S100A14Q9HCY8 104 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 MTMR10Q9NXD2 777 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 SMIM28A0A1B0GU29 152 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 PLIN3O60664 434 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 SNUPNO95149 360 aaKnown RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 ETS2P15036 469 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 GOT1P17174 413 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 NCF2P19878 526 aaPredicted RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 SLC6A3Q01959 620 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 USP4Q13107 963 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 MFSD10Q14728 455 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 C9orf57Q5W0N0 161 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 CDKL3Q8IVW4 592 aaPredicted RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 LRRC39Q96DD0 335 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 KCTD15Q96SI1 283 aaPredicted RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 ZNF670Q9BS34 389 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 RRAGCQ9HB90 399 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 TMEM216Q9P0N5 145 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 SEPT10Q9P0V9 454 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 GCATO75600 419 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 ERVK-10P10266 1014 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 IDH3AP50213 366 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 AQP4P55087 323 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 PITX1P78337 314 aaPredicted RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 INCA1Q0VD86 236 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 ASPHQ12797 758 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 NME3Q13232 169 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 STILQ15468 1287 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 PAN2Q504Q3 1202 aaKnown RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 FBXO47Q5MNV8 452 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 AP1ARQ63HQ0 302 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 ARCQ7LC44 396 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 TP53INP2Q8IXH6 220 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 ADAM32Q8TC27 787 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 SNX27Q96L92 541 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 MED10Q9BTT4 135 aa16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 APOBEC2Q9Y235 224 aaKnown RBP16.69■□□□□ 0.26
NKX3-1-201ENST00000380871 SBF1O95248 1867 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 A6NJR5 290 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 STK10O94804 968 aaKnown RBP16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 GSTA2P09210 222 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 DARSP14868 501 aaKnown RBP16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 POU5F1BQ06416 359 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 HEATR6Q6AI08 1181 aaKnown RBP16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 IQSEC1Q6DN90 963 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 HACE1Q8IYU2 909 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 AZIN2Q96A70 460 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 PGBD4Q96DM1 585 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 CSPG4P5Q96PW8 444 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 PARK7Q99497 189 aaKnown RBP16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 TRIM4Q9C037 500 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 AP4E1Q9UPM8 1137 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 KPNA7A9QM74 516 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 GPR32O75388 356 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 MLH1P40692 756 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 COPAP53621 1224 aa16.68■□□□□ 0.26
NKX3-1-201ENST00000380871 MSLNQ13421 630 aaPredicted RBP16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms