RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 CMASQ8NFW8 434 aaPredicted RBP12.8□□□□□ -0.36
PRPF40B-202ENST00000380281 PRPF18Q99633 342 aaKnown RBP12.8□□□□□ -0.36
PRPF40B-202ENST00000380281 NDUFA13Q9P0J0 144 aa12.8□□□□□ -0.36
PRPF40B-202ENST00000380281 TXNDC16Q9P2K2 825 aa12.8□□□□□ -0.36
PRPF40B-202ENST00000380281 CACNG4Q9UBN1 327 aa12.8□□□□□ -0.36
PRPF40B-202ENST00000380281 INPP5FQ9Y2H2 1132 aa12.8□□□□□ -0.36
PRPF40B-202ENST00000380281 SLC15A5A6NIM6 579 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 FAM189A1O60320 539 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 RFPL1O75677 317 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TRPA1O75762 1119 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 KRT38O76015 456 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TXNP10599 105 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 CCDC130P13994 396 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 MGAT1P26572 445 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 EFNA5P52803 228 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TAP1Q03518 808 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 C16orf72Q14CZ0 275 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 ANKDD1AQ495B1 522 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 LGSNQ5TDP6 509 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 ZPBP2Q6X784 338 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 PQLC3Q8N755 202 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 ZNF398Q8TD17 642 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 KCNN1Q92952 543 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 ALKBH8Q96BT7 664 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 MARK4Q96L34 752 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 CNBD2Q96M20 576 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 MRPL45Q9BRJ2 306 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 CNPY3Q9BT09 278 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 ZNF518BQ9C0D4 1074 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 DPEP3Q9H4B8 488 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 POPDC2Q9HBU9 364 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TIMMDC1Q9NPL8 285 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 FAIMQ9NVQ4 179 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TMEM98Q9Y2Y6 226 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TPP1O14773 563 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 XPOTO43592 962 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 APOEP02649 317 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 STIP1P31948 543 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 CCR10P46092 362 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 PITX1P78337 314 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 KCNJ11Q14654 390 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 IER5Q5VY09 327 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 FAM219BQ5XKK7 198 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 CCDC80Q76M96 950 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TMC7Q7Z402 723 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 UBR7Q8N806 425 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 GIPC3Q8TF64 312 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 XAB2Q9HCS7 855 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 MAP3K20Q9NYL2 800 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 QSER1Q2KHR3 1735 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 A0A1B0GTW7 788 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 DCXO43602 365 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 GOT1P17174 413 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TPH1P17752 444 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 IL4RP24394 825 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 NFKBIAP25963 317 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 TYK2P29597 1187 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 CA8P35219 290 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 ZNF143P52747 638 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 KRT72Q14CN4 511 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 RABGAP1LQ5R372 815 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 HEATR6Q6AI08 1181 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 PATL1Q86TB9 770 aaKnown RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 PNPLA1Q8N8W4 532 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 SENP6Q9GZR1 1112 aaPredicted RBP12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 ARMC7Q9H6L4 198 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 SELENONQ9NZV5 590 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 PAK5Q9P286 719 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 PLA2G4CQ9UP65 541 aa12.79□□□□□ -0.36
PRPF40B-202ENST00000380281 LAMA3Q16787 3333 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 NDC80O14777 642 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 SPTLC1O15269 473 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 NDUFB5O43674 189 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 INSRRP14616 1297 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 GLRBP48167 497 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 KIZQ2M2Z5 673 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 ATG16L1Q676U5 607 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 HPS6Q86YV9 775 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 C10orf107Q8IVU9 208 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 ADGRF2Q8IZF7 708 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 NUP93Q8N1F7 819 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 LRRC43Q8N309 656 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 SPATA6LQ8N4H0 392 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 ICA1LQ8NDH6 482 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 WWP1Q9H0M0 922 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 RBM38Q9H0Z9 239 aaKnown RBP12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 ELP3Q9H9T3 547 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 PLAC1Q9HBJ0 212 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 PIM2Q9P1W9 311 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 NFASCO94856 1347 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 HMX2A2RU54 273 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 C2CD4BA6NLJ0 364 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 ACKR2O00590 384 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 AIM2O14862 343 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 CILPO75339 1184 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 STAMBPO95630 424 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 SERPINB5P36952 375 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 ENTPD1P49961 510 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 TMEM132DQ14C87 1099 aa12.78□□□□□ -0.36
PRPF40B-202ENST00000380281 XRRA1Q6P2D8 792 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms