RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 CELF6Q96J87 481 aaKnown RBP17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 C1orf74Q96LT6 269 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 TMEM51Q9NW97 253 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 MARCH2Q9P0N8 246 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 SEPT10Q9P0V9 454 aa17.85■□□□□ 0.45
THUMPD2-201ENST00000378727 A0A087WUV0 522 aaPredicted RBP17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 E9PAM4 449 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 KCNK1O00180 336 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 OPHN1O60890 802 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 LINC00271P0C7V0 271 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 SLC2A3P11169 496 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 EN2P19622 333 aaPredicted RBP17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 HPDP32754 393 aaPredicted RBP17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 ATP1A2P50993 1020 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 TPGS2Q68CL5 300 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 PPP1R21Q6ZMI0 780 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 CAPN12Q6ZSI9 719 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 ZNF683Q8IZ20 524 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 ZNF567Q8N184 647 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 FBXO36Q8NEA4 188 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 PYROXD1Q8WU10 500 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 VPS37BQ9H9H4 285 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 HSFX1Q9UBD0 423 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 CTNNAL1Q9UBT7 734 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 F5H423 210 aaPredicted RBP17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 TLR5O60602 858 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 IGLV3-27P01718 113 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 HMGA1P17096 107 aaKnown RBP17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 TPSB2P20231 275 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 MX2P20592 715 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 DNAJB2P25686 324 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 PTPN3P26045 913 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 TUBP50607 506 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 STAT4Q14765 748 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 TPSAB1Q15661 275 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 ZNF534Q76KX8 674 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 ARHGAP12Q8IWW6 846 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 MCUQ8NE86 351 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 DPF3Q92784 378 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 CYP4F11Q9HBI6 524 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 NDFIP2Q9NV92 336 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 TEX264Q9Y6I9 313 aa17.84■□□□□ 0.45
THUMPD2-201ENST00000378727 DOCK4Q8N1I0 1966 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 ZBBXA8MT70 800 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 FGF10O15520 208 aaPredicted RBP17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 STK10O94804 968 aaKnown RBP17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 URODP06132 367 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 SSTR1P30872 391 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 ELK3P41970 407 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 LMAN1P49257 510 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 RAB33AQ14088 237 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 MS4A13Q5J8X5 152 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 BRD8Q9H0E9 1235 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 MPP6Q9NZW5 540 aa17.83■□□□□ 0.45
THUMPD2-201ENST00000378727 SLC12A8A0AV02 714 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 GJB5O95377 273 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 AGTP01019 485 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 APOEP02649 317 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 GCAP28676 217 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 FDFT1P37268 417 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 HTRA4P83105 476 aaPredicted RBP17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 ATP11CQ8NB49 1132 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 BADQ92934 168 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 FERMT1Q9BQL6 677 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 FRMD8Q9BZ67 464 aaPredicted RBP17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 CATSPERBQ9H7T0 1116 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 EURLQ9NYK6 297 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 CHMP2BQ9UQN3 213 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 YIPF1Q9Y548 306 aa17.83■□□□□ 0.44
THUMPD2-201ENST00000378727 LAMA2P24043 3122 aaKnown RBP17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 FGBP02675 491 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 HMBSP08397 361 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 PSMB4P28070 264 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 GRIA1P42261 906 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 MAGEA3P43357 314 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 IRAK1P51617 712 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 CCDC38Q502W7 563 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 SNX30Q5VWJ9 437 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 ARHGAP36Q6ZRI8 547 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 ZSCAN18Q8TBC5 510 aaPredicted RBP17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 CXXC1Q9P0U4 656 aaPredicted RBP17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 VANGL2Q9ULK5 521 aa17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 NYNRINQ9P2P1 1898 aaKnown RBP17.82■□□□□ 0.44
THUMPD2-201ENST00000378727 CARNS1A5YM72 827 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 ZNF840PA6NDX5 716 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 E7EVH7 732 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 SHOX2O60902 331 aaPredicted RBP17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 LILRB3O75022 631 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 PPM1AP35813 382 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 PPP2R2AP63151 447 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 RING1Q06587 406 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 ZBTB17Q13105 803 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 PARP6Q2NL67 630 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 PID1Q7Z2X4 250 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 NLRP14Q86W24 1093 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 CYP4X1Q8N118 509 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 ZNF276Q8N554 614 aa17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 RTL3Q8N8U3 475 aaKnown RBP17.81■□□□□ 0.44
THUMPD2-201ENST00000378727 ATP6V0D2Q8N8Y2 350 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms