RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 PDZD4Q76G19 769 aaPredicted RBP19.98■□□□□ 0.79
SSU72-204ENST00000378726 SPATA21Q7Z572 469 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 CCNYQ8ND76 341 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 SPPL2BQ8TCT7 592 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 PYROXD1Q8WU10 500 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 EPAS1Q99814 870 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 SMOC2Q9H3U7 446 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 ABHD2P08910 425 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 ZNF135P52742 658 aaPredicted RBP19.98■□□□□ 0.79
SSU72-204ENST00000378726 AP1B1Q10567 949 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 MTM1Q13496 603 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 STAT4Q14765 748 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 MGAT5BQ3V5L5 792 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 CGB2Q6NT52 195 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 DENND5BQ6ZUT9 1274 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 KIF2BQ8N4N8 673 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 PHACTR1Q9C0D0 580 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 SIK2Q9H0K1 926 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 OSBPL2Q9H1P3 480 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 CRISPLD1Q9H336 500 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 PRDM12Q9H4Q4 367 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 CWH43Q9H720 699 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 ARHGEF38Q9NXL2 777 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 IL37Q9NZH6 218 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 PRKAG3Q9UGI9 489 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 L3MBTL1Q9Y468 752 aa19.98■□□□□ 0.79
SSU72-204ENST00000378726 E7ESA3 106 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 TCEA3O75764 348 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 LRIG2O94898 1065 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 METTL18O95568 372 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 RPSAP08865 295 aaKnown RBP19.97■□□□□ 0.79
SSU72-204ENST00000378726 VAV1P15498 845 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 EPHB2P29323 1055 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 CCR1P32246 355 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 SMARCB1Q12824 385 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 DUSP4Q13115 394 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 BBS9Q3SYG4 887 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 BRMS1LQ5PSV4 323 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 TP53INP2Q8IXH6 220 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 VPS37BQ9H9H4 285 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 ARL2BPQ9Y2Y0 163 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 CDY1Q9Y6F8 540 aa19.97■□□□□ 0.79
SSU72-204ENST00000378726 MSI1O43347 362 aaKnown RBP19.96■□□□□ 0.79
SSU72-204ENST00000378726 VNN2O95498 520 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 YWHAQP27348 245 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 LRRC26Q2I0M4 334 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 CAPN12Q6ZSI9 719 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 FITM2Q8N6M3 262 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 AGAP11Q8TF27 550 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 TOP1MTQ969P6 601 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 P2RY11Q96G91 374 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 TGS1Q96RS0 853 aaKnown RBP19.96■□□□□ 0.79
SSU72-204ENST00000378726 SEPT5Q99719 369 aaPredicted RBP19.96■□□□□ 0.79
SSU72-204ENST00000378726 OXCT2Q9BYC2 517 aaPredicted RBP19.96■□□□□ 0.79
SSU72-204ENST00000378726 MKI67P46013 3256 aaKnown RBP19.96■□□□□ 0.79
SSU72-204ENST00000378726 TANC1Q9C0D5 1861 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 PPP1R12AO14974 1030 aaPredicted RBP19.96■□□□□ 0.79
SSU72-204ENST00000378726 APRTP07741 180 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 SRGAP2BP0DMP2 458 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 RFC2P35250 354 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 USP41Q3LFD5 358 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 PPP1R21Q6ZMI0 780 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 ARHGEF18Q6ZSZ5 1173 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 SRRM1Q8IYB3 904 aaKnown RBP19.96■□□□□ 0.79
SSU72-204ENST00000378726 VPS52Q8N1B4 723 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 ARHGAP18Q8N392 663 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 FBXO22Q8NEZ5 403 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 RMDN2Q96LZ7 410 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 HAPLN3Q96S86 360 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 FERMT1Q9BQL6 677 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 C11orf49Q9H6J7 331 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 GMIPQ9P107 970 aa19.96■□□□□ 0.79
SSU72-204ENST00000378726 ZMYND8Q9ULU4 1186 aaPredicted RBP19.96■□□□□ 0.79
SSU72-204ENST00000378726 FNDC1Q4ZHG4 1894 aaPredicted RBP19.95■□□□□ 0.78
SSU72-204ENST00000378726 A8MUI8 341 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 HAPLN1P10915 354 aaPredicted RBP19.95■□□□□ 0.78
SSU72-204ENST00000378726 STX2P32856 288 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 GLUD2P49448 558 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 PRKD1Q15139 912 aaPredicted RBP19.95■□□□□ 0.78
SSU72-204ENST00000378726 ANKRD20A2Q5SQ80 823 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 SPOUT1Q5T280 376 aaKnown RBP19.95■□□□□ 0.78
SSU72-204ENST00000378726 ANKRD20A1Q5TYW2 823 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 ANKRD20A3Q5VUR7 823 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 ANKLE1Q8NAG6 615 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 FBXO36Q8NEA4 188 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 ARMC5Q96C12 935 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 IGSF21Q96ID5 467 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 LGALS13Q9UHV8 139 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 TRIM33Q9UPN9 1127 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 COL4A4P53420 1690 aaPredicted RBP19.95■□□□□ 0.78
SSU72-204ENST00000378726 HGSO14964 777 aaPredicted RBP19.95■□□□□ 0.78
SSU72-204ENST00000378726 EFEMP2O95967 443 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 KRT16P08779 473 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 ALADP13716 330 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 ITGB8P26012 769 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 MGAT5Q09328 741 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 FAM117BQ6P1L5 589 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 TMCO2Q7Z6W1 182 aaPredicted RBP19.95■□□□□ 0.78
SSU72-204ENST00000378726 PALM2Q8IXS6 379 aa19.95■□□□□ 0.78
SSU72-204ENST00000378726 FBXO32Q969P5 355 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms