RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 HNRNPRO43390 633 aaKnown RBP11.39□□□□□ -0.59
CCDC40-203ENST00000374877 CLPTM1O96005 669 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 ALDOAP04075 364 aaKnown RBP11.39□□□□□ -0.59
CCDC40-203ENST00000374877 USP46P62068 366 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 ITGA9Q13797 1035 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 CA9Q16790 459 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 ATG14Q6ZNE5 492 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 ZNF784Q8NCA9 323 aaPredicted RBP11.39□□□□□ -0.59
CCDC40-203ENST00000374877 PCDH19Q8TAB3 1148 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 PIP4K2CQ8TBX8 421 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 DDX18Q9NVP1 670 aaKnown RBP11.39□□□□□ -0.59
CCDC40-203ENST00000374877 GALNT8Q9NY28 637 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 ARHGAP26Q9UNA1 814 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 PHF24Q9UPV7 400 aa11.39□□□□□ -0.59
CCDC40-203ENST00000374877 TNPO2O14787 897 aaKnown RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 MSCO60682 206 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 ASLP04424 464 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 PRKCBP05771 671 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 IL4RP24394 825 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 RGS7P49802 495 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 FCGRTP55899 365 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 PPM1JQ5JR12 505 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 LCA5Q86VQ0 697 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 RNF149Q8NC42 400 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 MCUQ8NE86 351 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 KCNN1Q92952 543 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 DGCR14Q96DF8 476 aaKnown RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 DCUN1D1Q96GG9 259 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 ELOVL4Q9GZR5 314 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 XPNPEP3Q9NQH7 507 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 NDUFA13Q9P0J0 144 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 CPSF3Q9UKF6 684 aaKnown RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 APPL1Q9UKG1 709 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 TMCO1Q9UM00 188 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 C2CD4BA6NLJ0 364 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 H3BNX3 289 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 AIM2O14862 343 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 SMIM18P0DKX4 95 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 COX4I1P13073 169 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 TGM2P21980 687 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 ARRB2P32121 409 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 INHBCP55103 352 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 SESN2P58004 480 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 DUSP28Q4G0W2 176 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 EXOC8Q8IYI6 725 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 PPTC7Q8NI37 304 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 RTP4Q96DX8 246 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 CNBD2Q96M20 576 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 BTBD9Q96Q07 612 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 KCNK16Q96T55 309 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 SORT1Q99523 831 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 ACO2Q99798 780 aaKnown RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 GRIP2Q9C0E4 1043 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 SMARCAD1Q9H4L7 1026 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 PCDH18Q9HCL0 1135 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 LMCD1Q9NZU5 365 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 BCLAF3A2AJT9 711 aaKnown RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 ITGA2BP08514 1039 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 RALBP11234 206 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 HOXD8P13378 290 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 GPD2P43304 727 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 ATXN3P54252 364 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 GRM1Q13255 1194 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 SURF1Q15526 300 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 TARBP2Q15633 366 aaKnown RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 FAM183BPQ6ZVS7 135 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 PQLC1Q8N2U9 271 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 CDKL2Q92772 493 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 LENG1Q96BZ8 264 aaPredicted RBP11.38□□□□□ -0.59
CCDC40-203ENST00000374877 DNAJC28Q9NX36 388 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 TMEM216Q9P0N5 145 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 TXNDC16Q9P2K2 825 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 LZTS1Q9Y250 596 aa11.38□□□□□ -0.59
CCDC40-203ENST00000374877 MYOCOSA0A1B0GUC4 107 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 CXCL8P10145 99 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 CNTFP26441 200 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 TYK2P29597 1187 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 MSX2P35548 267 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 RPL5P46777 297 aaKnown RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 ABCE1P61221 599 aaKnown RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 GBE1Q04446 702 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 BTKQ06187 659 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 HSDL1Q3SXM5 330 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 IYDQ6PHW0 289 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PACS1Q6VY07 963 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 TIFABQ6ZNK6 161 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 KBTBD6Q86V97 674 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 CDKL3Q8IVW4 592 aaPredicted RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 LRRC71Q8N4P6 559 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PGBD4Q96DM1 585 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 ATXN7L3BQ96GX2 97 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 TMEM176AQ96HP8 235 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PPP1R36Q96LQ0 422 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 LRGUKQ96M69 825 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 SNRNP25Q9BV90 132 aaKnown RBP11.37□□□□□ -0.59
CCDC40-203ENST00000374877 Q9H521 79 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 ZNF358Q9NW07 568 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PCDHGB4Q9UN71 923 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PCDHGB5Q9Y5G0 923 aa11.37□□□□□ -0.59
CCDC40-203ENST00000374877 PSAT1Q9Y617 370 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms