RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 DHRS4L1P0CG22 281 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 GLUD2P49448 558 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 SARNPP82979 210 aaKnown RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 ZBTB17Q13105 803 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 E2F5Q15329 346 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 SDHAF4Q5VUM1 108 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 C4orf22Q6V702 233 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 ZCCHC23Q6ZST2 131 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 GORASP1Q9BQQ3 440 aa16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 MARCOQ9UEW3 520 aaPredicted RBP16.42■□□□□ 0.22
CNKSR1-202ENST00000374253 KRT38O76015 456 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 KITP10721 976 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 CRYMQ14894 314 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 LRRC8BQ6P9F7 803 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 CEP57Q86XR8 500 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 PSTKQ8IV42 348 aaKnown RBP16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 FBXO6Q9NRD1 293 aaPredicted RBP16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 MOCS1Q9NZB8 636 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 SFMBT1Q9UHJ3 866 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 PLLPQ9Y342 182 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 LAMA3Q16787 3333 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 MGRN1O60291 552 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 UNC5CO95185 931 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 ATP6V1G2O95670 118 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 TPH1P17752 444 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 SEMA3BQ13214 749 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 INTS6LQ5JSJ4 861 aaKnown RBP16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 OVOS1Q6IE37 1185 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 ARHGAP36Q6ZRI8 547 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 ZNF180Q9UJW8 692 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 PTCH2Q9Y6C5 1203 aa16.41■□□□□ 0.22
CNKSR1-202ENST00000374253 A0A0U1RQF3 1178 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 CA12O43570 354 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 TROVE2P10155 538 aaKnown RBP eCLIP16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 ALDH3A1P30838 453 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 RPL9P32969 192 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 NUMBP49757 651 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 PARP6Q2NL67 630 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 LGSNQ5TDP6 509 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 MRPL10Q7Z7H8 261 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 METTL23Q86XA0 190 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 ZNF280BQ86YH2 543 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 DNAAF3Q8N9W5 541 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 DQX1Q8TE96 717 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 AZIN2Q96A70 460 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 FCRL3Q96P31 734 aaPredicted RBP16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 RPS6KL1Q9Y6S9 549 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 FAM237BA0A1B0GVD1 139 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 GOLGA8TH3BQL2 631 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 ATP9BO43861 1147 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 CD68P34810 354 aaPredicted RBP16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 CHI3L2Q15782 390 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 ARL13BQ3SXY8 428 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 PPM1JQ5JR12 505 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 RSPH1Q8WYR4 309 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 UPF3AQ9H1J1 476 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 NOD2Q9HC29 1040 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 ZFP69BQ9UJL9 534 aa16.4■□□□□ 0.22
CNKSR1-202ENST00000374253 TDRD15B5MCY1 1934 aaKnown RBP16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 TOMM70O94826 608 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 MOCS2O96007 188 aaPredicted RBP16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 JCHAINP01591 159 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 T-ENOLP0DO92 83 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 INHBEP58166 350 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 TMPRSS15P98073 1019 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 BST1Q10588 318 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 SREBF2Q12772 1141 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 PPP2R5DQ14738 602 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 CERCAMQ5T4B2 595 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 ASRGL1Q7L266 308 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 NTAN1Q96AB6 310 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 FERMT1Q9BQL6 677 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 TMEM120AQ9BXJ8 343 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 TRIM55Q9BYV6 548 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 RNF186Q9NXI6 227 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 HEY2Q9UBP5 337 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 CFAP73A6NFT4 308 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 DFFAO00273 331 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 TPP1O14773 563 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 ALDOAP04075 364 aaKnown RBP16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 NFKB1P19838 968 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 SERPINB3P29508 390 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 GRIK1P39086 918 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 FAM171BQ6P995 826 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 OTOP3Q7RTS5 596 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 TTC7BQ86TV6 843 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 RASSF3Q86WH2 238 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 SCN4BQ8IWT1 228 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 SLC9A7Q96T83 725 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 ACBD6Q9BR61 282 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 C20orf27Q9GZN8 174 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 KCNK13Q9HB14 408 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 CSNK1G1Q9HCP0 422 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 DMAP1Q9NPF5 467 aaPredicted RBP16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 ARHGEF3Q9NR81 526 aa16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 PRG3Q9Y2Y8 225 aaPredicted RBP16.39■□□□□ 0.21
CNKSR1-202ENST00000374253 TMEM88BA6NKF7 163 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 C9IYK1 514 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 DCTN3O75935 186 aa16.38■□□□□ 0.21
CNKSR1-202ENST00000374253 CXCR3P49682 368 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms