RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 PCDHB7Q9Y5E2 793 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 BACE2Q9Y5Z0 518 aa12.93□□□□□ -0.34
PRPF4-202ENST00000374199 FAM47DPA6NHR8 397 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 CAPN9O14815 690 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 PEX11BO96011 259 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 HAPLN1P10915 354 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-202ENST00000374199 TPI1P60174 286 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 PDZD4Q76G19 769 aaPredicted RBP12.92□□□□□ -0.34
PRPF4-202ENST00000374199 ADAM32Q8TC27 787 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 EDEM1Q92611 657 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 TADA1Q96BN2 335 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 IL12RB2Q99665 862 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 PRKAG3Q9UGI9 489 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 GRID1Q9ULK0 1009 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 PCDHB5Q9Y5E4 795 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 HMX2A2RU54 273 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 MTMR11A4FU01 709 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 AP2A1O95782 977 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 APOEP02649 317 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 BRAFP15056 766 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 MX2P20592 715 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 CCNCP24863 283 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 RFC2P35250 354 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 ETV4P43268 484 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 PSEN1P49768 467 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 USP46P62068 366 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 ITIH4Q14624 930 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 SRLQ86TD4 932 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 PRPF39Q86UA1 669 aaKnown RBP12.92□□□□□ -0.34
PRPF4-202ENST00000374199 LRRC49Q8IUZ0 686 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 LZTR1Q8N653 840 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 SPPL2BQ8TCT7 592 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 SH3TC2Q8TF17 1288 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 TTC17Q96AE7 1141 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 ALKBH8Q96BT7 664 aaKnown RBP12.92□□□□□ -0.34
PRPF4-202ENST00000374199 SERPINB11Q96P15 392 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 CRISPLD1Q9H336 500 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 FOXO6A8MYZ6 492 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 RING1Q06587 406 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 NUGGCQ68CJ6 796 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 FUT10Q6P4F1 479 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 MARK2Q7KZI7 788 aaKnown RBP12.92□□□□□ -0.34
PRPF4-202ENST00000374199 COLGALT1Q8NBJ5 622 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 GSDMBQ8TAX9 411 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 OVCA2Q8WZ82 227 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 MTRRQ9UBK8 725 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 CHMP2BQ9UQN3 213 aa12.92□□□□□ -0.34
PRPF4-202ENST00000374199 A0A1W2PQH9 124 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 DRGXA6NNA5 263 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 RASA4BC9J798 803 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 NDUFAB1O14561 156 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 RASA4O43374 803 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 OR4Q2P0C623 313 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 CCR1P32246 355 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 SERPINB6P35237 376 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 ZNF280DQ6N043 979 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 CGB2Q6NT52 195 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 LRRC43Q8N309 656 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 MLPHQ9BV36 600 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-202ENST00000374199 NOL6Q9H6R4 1146 aaKnown RBP12.91□□□□□ -0.34
PRPF4-202ENST00000374199 VPS37BQ9H9H4 285 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.91□□□□□ -0.34
PRPF4-202ENST00000374199 TM9SF1O15321 606 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 RTN3O95197 1032 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-202ENST00000374199 CCL5P13501 91 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 MAGEA12P43365 314 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 OR1G1P47890 313 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 CCT5P48643 541 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 MLLT6P55198 1093 aaPredicted RBP12.91□□□□□ -0.34
PRPF4-202ENST00000374199 ZBTB17Q13105 803 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 MTA1Q13330 715 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 RTP2Q5QGT7 225 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 ARHGEF18Q6ZSZ5 1173 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 GPR65Q8IYL9 337 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 UMODL1-AS1Q8N2C9 162 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 MPP5Q8N3R9 675 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 ANKS4BQ8N8V4 417 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 TEKT5Q96M29 485 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 NAT9Q9BTE0 207 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 TRABDQ9H4I3 376 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 HS3ST4Q9Y661 456 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 SHROOM3Q8TF72 1996 aa12.91□□□□□ -0.34
PRPF4-202ENST00000374199 MAFKO60675 156 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 PAGE1O75459 146 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 APRTP07741 180 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 ATP2A2P16615 1042 aaKnown RBP12.9□□□□□ -0.34
PRPF4-202ENST00000374199 GATMP50440 423 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 BBS9Q3SYG4 887 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 KBTBD12Q3ZCT8 623 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 LACTB2Q53H82 288 aaPredicted RBP12.9□□□□□ -0.34
PRPF4-202ENST00000374199 TEX44Q53QW1 395 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 SLC26A11Q86WA9 606 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 TMEM173Q86WV6 379 aaPredicted RBP12.9□□□□□ -0.34
PRPF4-202ENST00000374199 ZNF784Q8NCA9 323 aaPredicted RBP12.9□□□□□ -0.34
PRPF4-202ENST00000374199 SMIM23A6NLE4 172 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 H7C4K7 107 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 ZWINTO95229 277 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 MAP3K6O95382 1288 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 TAC1P20366 129 aa12.9□□□□□ -0.34
PRPF4-202ENST00000374199 GRIK1P39086 918 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms