RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 PEX1O43933 1283 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 FBXO21O94952 628 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 ITGB3P05106 788 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 IQCF3P0C7M6 154 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 PKNOX1P55347 436 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 SH3BGRP55822 239 aaPredicted RBP15.19■□□□□ 0.02
COL9A2-202ENST00000372748 IGBP1P78318 339 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 MYBPC1Q00872 1141 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 KLF10Q13118 480 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 METTL7BQ6UX53 244 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 LBX2Q6XYB7 198 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 TIFABQ6ZNK6 161 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 MCUQ8NE86 351 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 CEP70Q8NHQ1 597 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 USP13Q92995 863 aaPredicted RBP15.19■□□□□ 0.02
COL9A2-202ENST00000372748 LRGUKQ96M69 825 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 FAM210AQ96ND0 272 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 OR52B2Q96RD2 323 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 KCNK16Q96T55 309 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 EPB41L1Q9H4G0 881 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 PSMD13Q9UNM6 376 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 SSX2IPQ9Y2D8 614 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 BCLAF3A2AJT9 711 aaKnown RBP15.19■□□□□ 0.02
COL9A2-202ENST00000372748 TYK2P29597 1187 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 HPCAP84074 193 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 SLC10A2Q12908 348 aaPredicted RBP15.19■□□□□ 0.02
COL9A2-202ENST00000372748 GRM1Q13255 1194 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 C1orf127Q8N9H9 656 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 MRPL1Q9BYD6 325 aaKnown RBP15.19■□□□□ 0.02
COL9A2-202ENST00000372748 CEP41Q9BYV8 373 aa15.19■□□□□ 0.02
COL9A2-202ENST00000372748 WDR55Q9H6Y2 383 aaPredicted RBP15.19■□□□□ 0.02
COL9A2-202ENST00000372748 DENRO43583 198 aaKnown RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 AMHP03971 560 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 ABCG1P45844 678 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 THOP1P52888 689 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 MXD4Q14582 209 aaPredicted RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 ACAP1Q15027 740 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 CCDC14Q49A88 953 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 GADL1Q6ZQY3 521 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 ABTB1Q969K4 478 aaPredicted RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 SNRNP25Q9BV90 132 aaKnown RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 RPF1Q9H9Y2 349 aaKnown RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 MYO18AQ92614 2054 aaKnown RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 XRCC1P18887 633 aaPredicted RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 MAGEA6P43360 314 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 GTF2A2P52657 109 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 FLOT2Q14254 428 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 PDK1Q15118 436 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 STILQ15468 1287 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 SURF1Q15526 300 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 NAPRTQ6XQN6 538 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 CDRT15Q96T59 188 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 GPR20Q99678 358 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 CDT1Q9H211 546 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 GNEQ9Y223 722 aaKnown RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 LACTBL1A8MY62 500 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 GPR25O00155 361 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 HSPA4LO95757 839 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 ERVK-10P10266 1014 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 TFE3P19532 575 aaPredicted RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 TGM2P21980 687 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 GRK2P25098 689 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 ATXN1P54253 815 aaKnown RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 HDAC4P56524 1084 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 CDKL1Q00532 357 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 VGLL4Q14135 290 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 EFCAB12Q6NXP0 572 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 SNX32Q86XE0 403 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 APOBEC3FQ8IUX4 373 aaKnown RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 LILRA2Q8N149 483 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 TMEM176AQ96HP8 235 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 SENP6Q9GZR1 1112 aaPredicted RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 SPATC1LQ9H0A9 340 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 RBM38Q9H0Z9 239 aaKnown RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 PTPRHQ9HD43 1115 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 DCDC2Q9UHG0 476 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 MFHAS1Q9Y4C4 1052 aa15.18■□□□□ 0.02
COL9A2-202ENST00000372748 HEMK1Q9Y5R4 338 aaPredicted RBP15.18■□□□□ 0.02
COL9A2-202ENST00000372748 EVPLQ92817 2033 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 H3BSA7 217 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 ACKR2O00590 384 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 CDK4P11802 303 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 CPA3P15088 417 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 TCN1P20061 433 aaPredicted RBP15.17■□□□□ 0.02
COL9A2-202ENST00000372748 MGAT1P26572 445 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 GALK1P51570 392 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 TMEM259Q4ZIN3 620 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 RARS2Q5T160 578 aaKnown RBP15.17■□□□□ 0.02
COL9A2-202ENST00000372748 JADE1Q6IE81 842 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 KCNT2Q6UVM3 1135 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 TSHZ1Q6ZSZ6 1077 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 AMIGO2Q86SJ2 522 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 PLD6Q8N2A8 252 aaKnown RBP15.17■□□□□ 0.02
COL9A2-202ENST00000372748 C12orf29Q8N999 325 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 Q9H521 79 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 C6orf203Q9P0P8 240 aaPredicted RBP15.17■□□□□ 0.02
COL9A2-202ENST00000372748 A0A0J9YVX5 310 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 STX16-NPEPL1H3BU86 382 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 B4GALT4O60513 344 aa15.17■□□□□ 0.02
COL9A2-202ENST00000372748 USP2O75604 605 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms