RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 POLLQ9UGP5 575 aa16.58■□□□□ 0.24
CHD1L-203ENST00000369259 PTBP2Q9UKA9 531 aaKnown RBP16.58■□□□□ 0.24
CHD1L-203ENST00000369259 STX16-NPEPL1H3BU86 382 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 HTRA2O43464 458 aaPredicted RBP16.57■□□□□ 0.24
CHD1L-203ENST00000369259 GDF11O95390 407 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 MAGEA3P43357 314 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 SEPT6Q14141 434 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 EGFLAMQ63HQ2 1017 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 HOMEZQ8IX15 550 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 FAM47BQ8NA70 645 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 ZSCAN18Q8TBC5 510 aaPredicted RBP16.57■□□□□ 0.24
CHD1L-203ENST00000369259 FNIP1Q8TF40 1166 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 LRTOMTQ8WZ04 291 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 RTP4Q96DX8 246 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 XPNPEP3Q9NQH7 507 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 GID8Q9NWU2 228 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 TMEM216Q9P0N5 145 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 HESX1Q9UBX0 185 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 CNTNAP4Q9C0A0 1308 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 A0A1W2PPW3 197 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 CNOT3O75175 753 aaKnown RBP16.57■□□□□ 0.24
CHD1L-203ENST00000369259 CSPG5O95196 566 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 MX2P20592 715 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 PROZP22891 400 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 RPS3AP61247 264 aaKnown RBP16.57■□□□□ 0.24
CHD1L-203ENST00000369259 MMRN1Q13201 1228 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 ART3Q13508 389 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 RGS21Q2M5E4 152 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 CCDC153Q494R4 210 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 THOC7Q6I9Y2 204 aaKnown RBP16.57■□□□□ 0.24
CHD1L-203ENST00000369259 SNRNP48Q6IEG0 339 aaKnown RBP16.57■□□□□ 0.24
CHD1L-203ENST00000369259 CERS5Q8N5B7 392 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 ARL10Q8N8L6 244 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 TRPV6Q9H1D0 765 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 GIN1Q9NXP7 522 aa16.57■□□□□ 0.24
CHD1L-203ENST00000369259 RBAKQ9NYW8 714 aaPredicted RBP16.57■□□□□ 0.24
CHD1L-203ENST00000369259 MRPL11Q9Y3B7 192 aaKnown RBP16.57■□□□□ 0.24
CHD1L-203ENST00000369259 GOLGA8QA0A0J9YX86 632 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 GOLGA8OA6NCC3 632 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 GOLGA8NF8WBI6 632 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 SLC22A2O15244 555 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 SPTLC1O15269 473 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 ENTPD3O75355 529 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 TCN1P20061 433 aaPredicted RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 MIPP30301 263 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 CDH5P33151 784 aaPredicted RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 BMXP51813 675 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 APOBEC3HQ6NTF7 200 aaKnown RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 MAMDC4Q6UXC1 1216 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 CYS1Q717R9 158 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 TERB1Q8NA31 727 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 ACO2Q99798 780 aaKnown RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 ANKEF1Q9NU02 776 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 PI4KBQ9UBF8 816 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 IPO11Q9UI26 975 aaKnown RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 DDTLA6NHG4 134 aaPredicted RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 TRIM38O00635 465 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 TPD52L2O43399 206 aaKnown RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 TRUB2O95900 331 aaKnown RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 CD247P20963 164 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 FGFR3P22607 806 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 RPL10P27635 214 aaKnown RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 DCKP27707 260 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 TTKP33981 857 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 ACOT2P49753 483 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 TCP10Q12799 353 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 RFTN1Q14699 578 aaPredicted RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 NR1D2Q14995 579 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 FAM47CQ5HY64 1035 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 DEPDC1Q5TB30 811 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 NANOGNBQ7Z5D8 188 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 TDRD5Q8NAT2 981 aaKnown RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 NPLQ9BXD5 320 aaPredicted RBP16.56■□□□□ 0.24
CHD1L-203ENST00000369259 PDZD7Q9H5P4 517 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 EFCAB1Q9HAE3 211 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 PRDM16Q9HAZ2 1276 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 PCDHAC2Q9Y5I4 1007 aa16.56■□□□□ 0.24
CHD1L-203ENST00000369259 ZNF541Q9H0D2 1346 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 KCNQ2O43526 872 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 NFKBIAP25963 317 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 ADORA2AP29274 412 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 POLR2BP30876 1174 aaKnown RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 SOX10P56693 466 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 BNIP3Q12983 259 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 TFDP2Q14188 446 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 HERC3Q15034 1050 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 NHSL2Q5HYW2 709 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 FGD3Q5JSP0 725 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 AARS2Q5JTZ9 985 aaKnown RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 RSBN1LQ6PCB5 846 aaPredicted RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 ZNF534Q76KX8 674 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 EEPD1Q7L9B9 569 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 CPSF7Q8N684 471 aaKnown RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 FAM156AQ8NDB6 213 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 ASB9Q96DX5 294 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 WDR55Q9H6Y2 383 aaPredicted RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 AGO4Q9HCK5 861 aaKnown RBP16.55■□□□□ 0.24
CHD1L-203ENST00000369259 SLC17A6Q9P2U8 582 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 ERGIC3Q9Y282 383 aa16.55■□□□□ 0.24
CHD1L-203ENST00000369259 GIT1Q9Y2X7 761 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms