RNA–Protein interactions for RNA: ENST00000361293.9

CHD1L-201, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2 BASIC

Gene CHD1L, Length 2,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-201ENST00000361293 AIF1P55008 147 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 NIPAL4Q0D2K0 466 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 IFRD2Q12894 506 aaPredicted RBP20.61■□□□□ 0.89
CHD1L-201ENST00000361293 CRYMQ14894 314 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 ACBD6Q9BR61 282 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 WDCPQ9H6R7 721 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 OR12D3Q9UGF7 316 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 A0A0G2JND7 137 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 A8MUI8 341 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 DCTN3O75935 186 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 ATP6V1G2O95670 118 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 CXCR3P49682 368 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 SREBF2Q12772 1141 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 NDUFAF2Q8N183 169 aa20.61■□□□□ 0.89
CHD1L-201ENST00000361293 TTC3P53804 2025 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 LRIG2O94898 1065 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 T-ENOLP0DO92 83 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 TROVE2P10155 538 aaKnown RBP eCLIP20.6■□□□□ 0.89
CHD1L-201ENST00000361293 ELNP15502 786 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 ALDH3A1P30838 453 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 PPIDQ08752 370 aaKnown RBP20.6■□□□□ 0.89
CHD1L-201ENST00000361293 ZBTB17Q13105 803 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 PM20D1Q6GTS8 502 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 CCSAPQ6IQ19 270 aaPredicted RBP20.6■□□□□ 0.89
CHD1L-201ENST00000361293 OR52K1Q8NGK4 314 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 KCNK13Q9HB14 408 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 HAO1Q9UJM8 370 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 C2orf71A6NGG8 1288 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 B4GALT3O60512 393 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 CBX6O95503 412 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 CYP11A1P05108 521 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 CD68P34810 354 aaPredicted RBP20.6■□□□□ 0.89
CHD1L-201ENST00000361293 PGFP49763 221 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 NKX3-2P78367 333 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 MTDHQ86UE4 582 aaKnown RBP20.6■□□□□ 0.89
CHD1L-201ENST00000361293 MTBPQ96DY7 904 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 FERMT1Q9BQL6 677 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 BAIAP2L1Q9UHR4 511 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 STK38LQ9Y2H1 464 aa20.6■□□□□ 0.89
CHD1L-201ENST00000361293 COL4A4P53420 1690 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 PTPRDP23468 1912 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 NLRC5Q86WI3 1866 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 CCDC195A0A1B0GUA6 201 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 ZBTB24O43167 697 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 PGAM1P18669 254 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 EPHB2P29323 1055 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 SKIV2L2P42285 1042 aaKnown RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 HCAR3P49019 387 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 RAB27AP51159 221 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 ARL13BQ3SXY8 428 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 TAF1BQ53T94 588 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 ZNF449Q6P9G9 518 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 CYS1Q717R9 158 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 MARK2Q7KZI7 788 aaKnown RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 DQX1Q8TE96 717 aaKnown RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 RSPH1Q8WYR4 309 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 ZNF395Q9H8N7 513 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 DMAP1Q9NPF5 467 aaPredicted RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 M0QZQ0 153 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 GRIK3Q13003 919 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 TUSC3Q13454 348 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 OVOS1Q6IE37 1185 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 METTL23Q86XA0 190 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 KLHDC9Q8NEP7 349 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 UTP4Q969X6 686 aaKnown RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 CELF6Q96J87 481 aaKnown RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 TRIM55Q9BYV6 548 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 MKS1Q9NXB0 559 aa20.59■□□□□ 0.89
CHD1L-201ENST00000361293 MRPL42Q9Y6G3 142 aaKnown RBP20.59■□□□□ 0.89
CHD1L-201ENST00000361293 ALDOAP04075 364 aaKnown RBP20.58■□□□□ 0.89
CHD1L-201ENST00000361293 F7P08709 466 aaPredicted RBP20.58■□□□□ 0.89
CHD1L-201ENST00000361293 PRKAR2AP13861 404 aaKnown RBP20.58■□□□□ 0.89
CHD1L-201ENST00000361293 PACS1Q6VY07 963 aa20.58■□□□□ 0.89
CHD1L-201ENST00000361293 FCRL3Q96P31 734 aaPredicted RBP20.58■□□□□ 0.89
CHD1L-201ENST00000361293 NOD2Q9HC29 1040 aa20.58■□□□□ 0.89
CHD1L-201ENST00000361293 DLDP09622 509 aaKnown RBP20.58■□□□□ 0.88
CHD1L-201ENST00000361293 ERVK-10P10266 1014 aa20.58■□□□□ 0.88
CHD1L-201ENST00000361293 TM4SF4P48230 202 aa20.58■□□□□ 0.88
CHD1L-201ENST00000361293 SERPINB9P50453 376 aa20.58■□□□□ 0.88
CHD1L-201ENST00000361293 ICE2Q659A1 982 aa20.58■□□□□ 0.88
CHD1L-201ENST00000361293 PRR11Q96HE9 360 aaPredicted RBP20.58■□□□□ 0.88
CHD1L-201ENST00000361293 TXLNGQ9NUQ3 528 aa20.58■□□□□ 0.88
CHD1L-201ENST00000361293 F9P00740 461 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 OR4Q2P0C623 313 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 GARSP41250 739 aaKnown RBP20.57■□□□□ 0.88
CHD1L-201ENST00000361293 BST1Q10588 318 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 TRIM71Q2Q1W2 868 aaKnown RBP20.57■□□□□ 0.88
CHD1L-201ENST00000361293 CLNKQ7Z7G1 428 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 STKLD1Q8NE28 680 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 ZNF398Q8TD17 642 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 HDAC11Q96DB2 347 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 EPAS1Q99814 870 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 MLPHQ9BV36 600 aaPredicted RBP20.57■□□□□ 0.88
CHD1L-201ENST00000361293 RRN3Q9NYV6 651 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 ZFP69BQ9UJL9 534 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 MAGED2Q9UNF1 606 aaPredicted RBP20.57■□□□□ 0.88
CHD1L-201ENST00000361293 RPS6KL1Q9Y6S9 549 aa20.57■□□□□ 0.88
CHD1L-201ENST00000361293 TMEM88BA6NKF7 163 aa20.56■□□□□ 0.88
CHD1L-201ENST00000361293 AP2A1O95782 977 aa20.56■□□□□ 0.88
CHD1L-201ENST00000361293 CRHR1P34998 444 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms