RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 AZIN2Q96A70 460 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 ZFRQ96KR1 1074 aaKnown RBP16.07■□□□□ 0.16
CTSA-202ENST00000354880 PRMT1Q99873 361 aaKnown RBP16.07■□□□□ 0.16
CTSA-202ENST00000354880 PRKD2Q9BZL6 878 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 PCDH9Q9HC56 1237 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 SMPD4Q9NXE4 827 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 PPARGC1AQ9UBK2 798 aaKnown RBP16.07■□□□□ 0.16
CTSA-202ENST00000354880 NFU1Q9UMS0 254 aa16.07■□□□□ 0.16
CTSA-202ENST00000354880 SZT2Q5T011 3432 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 IGLV3-10A0A075B6K4 115 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 CCDC195A0A1B0GUA6 201 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 HACD1B0YJ81 288 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 RFXAPO00287 272 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 CKMP06732 381 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 POU2F2P09086 479 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 PFKLP17858 780 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 CORO1AP31146 461 aaKnown RBP16.06■□□□□ 0.16
CTSA-202ENST00000354880 HLTFQ14527 1009 aaKnown RBP eCLIP16.06■□□□□ 0.16
CTSA-202ENST00000354880 SLC45A4Q5BKX6 768 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 NADSYN1Q6IA69 706 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 FBXL22Q6P050 247 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 PRUNE1Q86TP1 453 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 CHSY1Q86X52 802 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 DENND1CQ8IV53 801 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 CCDC33Q8N5R6 958 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 NPWQ8N729 165 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 FAM71DQ8N9W8 422 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 MRPL38Q96DV4 380 aaKnown RBP16.06■□□□□ 0.16
CTSA-202ENST00000354880 QKIQ96PU8 341 aaKnown RBP eCLIP16.06■□□□□ 0.16
CTSA-202ENST00000354880 ZYG11BQ9C0D3 744 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 MPP6Q9NZW5 540 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 CPQQ9Y646 472 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 DOCK4Q8N1I0 1966 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 NUP205Q92621 2012 aa16.06■□□□□ 0.16
CTSA-202ENST00000354880 TRAV19A0A0A6YYK7 116 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 NRG2O14511 850 aaPredicted RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 PPP1R12AO14974 1030 aaPredicted RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 NCAM2O15394 837 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 KLKB1P03952 638 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 ETS1P14921 441 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 TACR2P21452 398 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 RBL1P28749 1068 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 ADCY8P40145 1251 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 VPS41P49754 854 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 SLC7A9P82251 487 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 RBM10P98175 930 aaKnown RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 STXBP5Q5T5C0 1151 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 LZTR1Q8N653 840 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 NETO2Q8NC67 525 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 SHKBP1Q8TBC3 707 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 TFB1MQ8WVM0 346 aaKnown RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.05■□□□□ 0.163e-6■■■■■ 50.8
CTSA-202ENST00000354880 PPP2R3CQ969Q6 453 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 ZNF707Q96C28 371 aaPredicted RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 TCEAL4Q96EI5 215 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 RPRD1AQ96P16 312 aaPredicted RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 CDCA3Q99618 268 aaPredicted RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 PRDM12Q9H4Q4 367 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 USP29Q9HBJ7 922 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 ARFGAP3Q9NP61 516 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 GOLGA6L7A0A1B0GV03 622 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 WASH4PA8MWX3 477 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 F5H5T6 163 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 KCNN4O15554 427 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 ZSCAN5DPP0CG00 497 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 MX2P20592 715 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 DDX6P26196 483 aaKnown RBP eCLIP16.05■□□□□ 0.164e-8■■■□□ 17.6
CTSA-202ENST00000354880 IVDP26440 423 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 ECHS1P30084 290 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 FAM133BQ5BKY9 247 aaKnown RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 CHRDL2Q6WN34 429 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 NLRP14Q86W24 1093 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 TP53INP2Q8IXH6 220 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 RTL3Q8N8U3 475 aaKnown RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 LRRN4Q8WUT4 740 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 IGSF8Q969P0 613 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 RTP4Q96DX8 246 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 SNF8Q96H20 258 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 LGMNQ99538 433 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 SLC46A2Q9BY10 475 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 DONSONQ9NYP3 566 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 GRHL1Q9NZI5 618 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 WHRNQ9P202 907 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 AGO1Q9UL18 857 aaKnown RBP16.05■□□□□ 0.16
CTSA-202ENST00000354880 NOTCH4Q99466 2003 aa16.05■□□□□ 0.16
CTSA-202ENST00000354880 DRGXA6NNA5 263 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 MOSPD3O75425 235 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 RHOQP17081 205 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 ZXDBP98169 803 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 CALCOCO2Q13137 446 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 KCNC3Q14003 757 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 ARHGAP15Q53QZ3 475 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 GPR158Q5T848 1215 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 HEATR6Q6AI08 1181 aaKnown RBP16.04■□□□□ 0.16
CTSA-202ENST00000354880 GRASPQ7Z6J2 395 aaPredicted RBP16.04■□□□□ 0.16
CTSA-202ENST00000354880 CCNYQ8ND76 341 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 ADAMTS19Q8TE59 1207 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 WBP2Q969T9 261 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 KLC2Q9H0B6 622 aa16.04■□□□□ 0.16
CTSA-202ENST00000354880 PRO3102Q9H379 93 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms