RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 ORC6Q9Y5N6 252 aa14.03□□□□□ -0.16
SMC6-201ENST00000351948 ARHGAP10A1A4S6 786 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 EIF4E1BA6NMX2 242 aaKnown RBP14.02□□□□□ -0.16
SMC6-201ENST00000351948 CCL16O15467 120 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 TIMM44O43615 452 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 ERVK-10P10266 1014 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 ACADMP11310 421 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 NFKB1P19838 968 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 BOP1Q14137 746 aaKnown RBP14.02□□□□□ -0.16
SMC6-201ENST00000351948 ZNF792Q3KQV3 632 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 FUT10Q6P4F1 479 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 DOK6Q6PKX4 331 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 TMC3Q7Z5M5 1100 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 KCNMB4Q86W47 210 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 TRIM48Q8IWZ4 208 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 RIBC1Q8N443 379 aaPredicted RBP14.02□□□□□ -0.16
SMC6-201ENST00000351948 SLC4A11Q8NBS3 891 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 LRRC15Q8TF66 581 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 GRAMD1AQ96CP6 724 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 GBP5Q96PP8 586 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 UBE2OQ9C0C9 1292 aaKnown RBP14.02□□□□□ -0.16
SMC6-201ENST00000351948 GLUD1P00367 558 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 BCL2L1Q07817 233 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 CCDC15Q0P6D6 951 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 TTLL9Q3SXZ7 439 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 SLC45A4Q5BKX6 768 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 LCLAT1Q6UWP7 414 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 RHOBTB2Q9BYZ6 727 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 CTNNAL1Q9UBT7 734 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 GTF2IRD1Q9UHL9 959 aa14.02□□□□□ -0.16
SMC6-201ENST00000351948 GOLGA4Q13439 2230 aaKnown RBP14.02□□□□□ -0.16
SMC6-201ENST00000351948 TTC36A6NLP5 189 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 PPEF2O14830 753 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 EEF1B2P24534 225 aaKnown RBP14.02□□□□□ -0.17
SMC6-201ENST00000351948 SLC5A3P53794 718 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 FAM182AQ5T1J6 154 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 FAM228AQ86W67 206 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 NTPCRQ9BSD7 190 aaKnown RBP14.02□□□□□ -0.17
SMC6-201ENST00000351948 PPCSQ9HAB8 311 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 PTPRHQ9HD43 1115 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 CNGB3Q9NQW8 809 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 PNMA8BQ9ULN7 279 aaPredicted RBP14.02□□□□□ -0.17
SMC6-201ENST00000351948 ACOT9Q9Y305 439 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 TRPM3Q9HCF6 1732 aaPredicted RBP14.02□□□□□ -0.17
SMC6-201ENST00000351948 H3BQF6 201 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 POLR2EP19388 210 aaKnown RBP14.02□□□□□ -0.17
SMC6-201ENST00000351948 TKTP29401 623 aaKnown RBP14.02□□□□□ -0.17
SMC6-201ENST00000351948 PPM1AP35813 382 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 SERPINB8P50452 374 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 IFI35P80217 286 aaPredicted RBP14.02□□□□□ -0.17
SMC6-201ENST00000351948 STARD3Q14849 445 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 TRADDQ15628 312 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 CCNJLQ8IV13 435 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 SEC16BQ96JE7 1060 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 HSD3B7Q9H2F3 369 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 ETNK2Q9NVF9 386 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 COG5Q9UP83 839 aa14.02□□□□□ -0.17
SMC6-201ENST00000351948 TMEM191CA6NGB0 347 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 RPL22P35268 128 aaKnown RBP14.01□□□□□ -0.17
SMC6-201ENST00000351948 ZNF516Q92618 1163 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 TBL1YQ9BQ87 522 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 CREBZFQ9NS37 354 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 DERAQ9Y315 318 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 NCANO14594 1321 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 LGR5O75473 907 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 AARS2Q5JTZ9 985 aaKnown RBP14.01□□□□□ -0.17
SMC6-201ENST00000351948 AUTS2Q8WXX7 1259 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 CDHR5Q9HBB8 845 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 BPIFA1Q9NP55 256 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 DMAC2Q9NW81 257 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 SEPT3Q9UH03 358 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 SALL4Q9UJQ4 1053 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 AURKCQ9UQB9 309 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 STXBP5LQ9Y2K9 1186 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 LIASO43766 372 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 PLK1P53350 603 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 ACOX1Q15067 660 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 ANKRD20A4Q4UJ75 823 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 KRT80Q6KB66 452 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 XYLT1Q86Y38 959 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 PHACTR4Q8IZ21 702 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 ZYG11BQ9C0D3 744 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 POLR1EQ9GZS1 481 aaKnown RBP14.01□□□□□ -0.17
SMC6-201ENST00000351948 MAP3K13O43283 966 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 PAGE1O75459 146 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 IGSF6O95976 241 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 CCNB1P14635 433 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 PGM1P36871 562 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 TAF11Q15544 211 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 RFWD3Q6PCD5 774 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 TSEN2Q8NCE0 465 aaKnown RBP14.01□□□□□ -0.17
SMC6-201ENST00000351948 MYCBPAPQ8TBZ2 947 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 BBS2Q9BXC9 721 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 VPS9D1Q9Y2B5 631 aa14.01□□□□□ -0.17
SMC6-201ENST00000351948 hCG_1818297A0A087WSY0 165 aa14□□□□□ -0.17
SMC6-201ENST00000351948 OR6C75A6NL08 312 aa14□□□□□ -0.17
SMC6-201ENST00000351948 MYO1CO00159 1063 aa14□□□□□ -0.17
SMC6-201ENST00000351948 GLRA3O75311 464 aa14□□□□□ -0.17
SMC6-201ENST00000351948 VNN1O95497 513 aa14□□□□□ -0.17
SMC6-201ENST00000351948 BGNP21810 368 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms