RNA–Protein interactions for RNA: ENST00000340993.10

TUBD1-202, Transcript of tubulin delta 1, humanhuman

TSL 1 (best) BASIC

Gene TUBD1, Length 1,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-202ENST00000340993 TRIM10Q9UDY6 481 aa13.64□□□□□ -0.23
TUBD1-202ENST00000340993 STOML2Q9UJZ1 356 aa13.64□□□□□ -0.23
TUBD1-202ENST00000340993 DUSP10Q9Y6W6 482 aa13.64□□□□□ -0.23
TUBD1-202ENST00000340993 NUP205Q92621 2012 aa13.64□□□□□ -0.23
TUBD1-202ENST00000340993 PRRT4C9JH25 899 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 LATS1O95835 1130 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 CHRNB1P11230 501 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 IL1R2P27930 398 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 HLA-FP30511 346 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 ADRA1BP35368 520 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 GSDMDP57764 484 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 PPP6R3Q5H9R7 873 aaPredicted RBP13.63□□□□□ -0.23
TUBD1-202ENST00000340993 EFHC2Q5JST6 749 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 ZFYVE27Q5T4F4 411 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 CYB5D2Q8WUJ1 264 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 ANP32BQ92688 251 aaKnown RBP13.63□□□□□ -0.23
TUBD1-202ENST00000340993 SPATA6Q9NWH7 488 aaPredicted RBP13.63□□□□□ -0.23
TUBD1-202ENST00000340993 OR12D3Q9UGF7 316 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 RAPGEFL1Q9UHV5 662 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 AP4E1Q9UPM8 1137 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 PAXBP1Q9Y5B6 917 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 PRR33A8MZF0 331 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 EIF3CLB5ME19 914 aaKnown RBP13.63□□□□□ -0.23
TUBD1-202ENST00000340993 K7EQS6 105 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 PRPSAP2O60256 369 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 GPR37L1O60883 481 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 ENDOD1O94919 500 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 LMAN2Q12907 356 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 FZD5Q13467 585 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 CCINQ13939 588 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 GAS6Q14393 721 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 RABGAP1LQ5R372 815 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 TSSK4Q6SA08 328 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 CCAR2Q8N163 923 aaKnown RBP13.63□□□□□ -0.23
TUBD1-202ENST00000340993 ZNF366Q8N895 744 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 TERB1Q8NA31 727 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 EIF3CQ99613 913 aaKnown RBP13.63□□□□□ -0.23
TUBD1-202ENST00000340993 SNRNP25Q9BV90 132 aaKnown RBP13.63□□□□□ -0.23
TUBD1-202ENST00000340993 IP6K2Q9UHH9 426 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 FZD10Q9ULW2 581 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 USP18Q9UMW8 372 aa13.63□□□□□ -0.23
TUBD1-202ENST00000340993 WDR87Q6ZQQ6 2873 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 GFRA2O00451 464 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 LUC7L3O95232 432 aaKnown RBP13.62□□□□□ -0.23
TUBD1-202ENST00000340993 CISD3P0C7P0 127 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 FECHP22830 423 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 AVPR2P30518 371 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 GRIA2P42262 883 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 MLLT6P55198 1093 aaPredicted RBP13.62□□□□□ -0.23
TUBD1-202ENST00000340993 MTAPQ13126 283 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 ATP13A4Q4VNC1 1196 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 EGFLAMQ63HQ2 1017 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 LRRC31Q6UY01 552 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 CHST9Q7L1S5 443 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 CCDC117Q8IWD4 279 aaPredicted RBP13.62□□□□□ -0.23
TUBD1-202ENST00000340993 ZNF687Q8N1G0 1237 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 PHTF2Q8N3S3 785 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 ALLCQ8N6M5 410 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 OR52K2Q8NGK3 314 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 RFFLQ8WZ73 363 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 AZIN2Q96A70 460 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 KCTD15Q96SI1 283 aaPredicted RBP13.62□□□□□ -0.23
TUBD1-202ENST00000340993 ACOX2Q99424 681 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 LACRTQ9GZZ8 138 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 UVRAGQ9P2Y5 699 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 DNAI1Q9UI46 699 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 GGA2Q9UJY4 613 aa13.62□□□□□ -0.23
TUBD1-202ENST00000340993 SDK1Q7Z5N4 2213 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 MACROD2A1Z1Q3 448 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.61□□□□□ -0.23
TUBD1-202ENST00000340993 WASH3PC4AMC7 463 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 LRIG2O94898 1065 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 KLF8O95600 359 aaPredicted RBP13.61□□□□□ -0.23
TUBD1-202ENST00000340993 DRD1P21728 446 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 MZF1P28698 734 aaPredicted RBP13.61□□□□□ -0.23
TUBD1-202ENST00000340993 CSKP41240 450 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 PXNP49023 591 aaPredicted RBP13.61□□□□□ -0.23
TUBD1-202ENST00000340993 LRRC32Q14392 662 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 FUT11Q495W5 492 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 TMEM215Q68D42 235 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 ANKS1BQ7Z6G8 1248 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 CACUL1Q86Y37 369 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 LRRC8AQ8IWT6 810 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 APCDD1Q8J025 514 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 KIAA1958Q8N8K9 716 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 HAPLN3Q96S86 360 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.61□□□□□ -0.23
TUBD1-202ENST00000340993 NDFIP2Q9NV92 336 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 CACNA2D2Q9NY47 1150 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 SALL4Q9UJQ4 1053 aa13.61□□□□□ -0.23
TUBD1-202ENST00000340993 NCAM2O15394 837 aa13.6□□□□□ -0.23
TUBD1-202ENST00000340993 PABPC1P11940 636 aaKnown RBP13.6□□□□□ -0.23
TUBD1-202ENST00000340993 CTSOP43234 321 aaPredicted RBP13.6□□□□□ -0.23
TUBD1-202ENST00000340993 TAS2R40P59535 323 aa13.6□□□□□ -0.23
TUBD1-202ENST00000340993 PIGHQ14442 188 aaPredicted RBP13.6□□□□□ -0.23
TUBD1-202ENST00000340993 LLGL1Q15334 1064 aa13.6□□□□□ -0.23
TUBD1-202ENST00000340993 CYP4V2Q6ZWL3 525 aaPredicted RBP13.6□□□□□ -0.23
TUBD1-202ENST00000340993 ZNF354CQ86Y25 554 aa13.6□□□□□ -0.23
TUBD1-202ENST00000340993 ZNF513Q8N8E2 541 aaPredicted RBP13.6□□□□□ -0.23
TUBD1-202ENST00000340993 TXNDC5Q8NBS9 432 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms