RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 ADAT2Q7Z6V5 191 aaKnown RBP15.22■□□□□ 0.03
CSRP1-201ENST00000340006 MFSD6LQ8IWD5 586 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 ADGRG2Q8IZP9 1017 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 PLCD3Q8N3E9 789 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 FGF14Q92915 247 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 IGSF8Q969P0 613 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 ELSPBP1Q96BH3 223 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 CSPG4P5Q96PW8 444 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 PRMT1Q99873 361 aaKnown RBP15.22■□□□□ 0.03
CSRP1-201ENST00000340006 ZNF670Q9BS34 389 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 CATSPERBQ9H7T0 1116 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 EPS15L1Q9UBC2 864 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 STOML2Q9UJZ1 356 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 DENND4AQ7Z401 1863 aa15.22■□□□□ 0.03
CSRP1-201ENST00000340006 TJP3O95049 919 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 PSMC3P17980 439 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 TERF1P54274 439 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 NRG1Q02297 640 aaPredicted RBP15.21■□□□□ 0.03
CSRP1-201ENST00000340006 USP4Q13107 963 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 LONRF2Q1L5Z9 754 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 FAM71BQ8TC56 605 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 OSCP1Q8WVF1 389 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 OTUB2Q96DC9 234 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 ZFYVE19Q96K21 471 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 PLA2G2FQ9BZM2 168 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 ZYG11BQ9C0D3 744 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 RCOR3Q9P2K3 495 aaPredicted RBP15.21■□□□□ 0.03
CSRP1-201ENST00000340006 RNF14Q9UBS8 474 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 LIMD1Q9UGP4 676 aa15.21■□□□□ 0.03
CSRP1-201ENST00000340006 CTAGE15A4D2H0 777 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 C2CD4DB7Z1M9 353 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 PDE2AO00408 941 aaPredicted RBP15.2■□□□□ 0.02
CSRP1-201ENST00000340006 CST8O60676 142 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 TBL1XO60907 577 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 FGGP02679 453 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 CTAGE8P0CG41 777 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 ERCC2P18074 760 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 FCARP24071 287 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 PAFAH1B1P43034 410 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 RPS24P62847 133 aaKnown RBP15.2■□□□□ 0.02
CSRP1-201ENST00000340006 SEMA3BQ13214 749 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 TFDP2Q14188 446 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 GRM2Q14416 872 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 ANO4Q32M45 955 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 TRIM68Q6AZZ1 485 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 VITQ6UXI7 678 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 ANKS1BQ7Z6G8 1248 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 CTAGE6Q86UF2 777 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 CTAGE4Q8IX94 777 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 PCDH19Q8TAB3 1148 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 TSC1Q92574 1164 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 RPP25Q9BUL9 199 aaKnown RBP15.2■□□□□ 0.02
CSRP1-201ENST00000340006 SMARCAL1Q9NZC9 954 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 PPARGC1AQ9UBK2 798 aaKnown RBP15.2■□□□□ 0.02
CSRP1-201ENST00000340006 NUP205Q92621 2012 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 MYO10Q9HD67 2058 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 hCG_1818297A0A087WSY0 165 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 DRGXA6NNA5 263 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 ECI2O75521 394 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 HTR7P34969 479 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 MPPE1Q53F39 396 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 TFAP2DQ7Z6R9 452 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 CIR1Q86X95 450 aaPredicted RBP15.2■□□□□ 0.02
CSRP1-201ENST00000340006 VSIG1Q86XK7 387 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 TMEM25Q86YD3 366 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 CCDC117Q8IWD4 279 aaPredicted RBP15.2■□□□□ 0.02
CSRP1-201ENST00000340006 CPXM2Q8N436 756 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 MYEOVQ96EZ4 313 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 NAP1L3Q99457 506 aaPredicted RBP15.2■□□□□ 0.02
CSRP1-201ENST00000340006 TRMT61BQ9BVS5 477 aaKnown RBP15.2■□□□□ 0.02
CSRP1-201ENST00000340006 EBF3Q9H4W6 596 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 PLK2Q9NYY3 685 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 NUMBLQ9Y6R0 609 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 DOCK4Q8N1I0 1966 aa15.2■□□□□ 0.02
CSRP1-201ENST00000340006 UQCRHLA0A096LP55 91 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 APOL1O14791 398 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 FGF10O15520 208 aaPredicted RBP15.19■□□□□ 0.02
CSRP1-201ENST00000340006 CNTN5O94779 1100 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 UQCRHP07919 91 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 ZFXP17010 805 aaPredicted RBP15.19■□□□□ 0.02
CSRP1-201ENST00000340006 OR1E1P30953 314 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 GDI1P31150 447 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 PPP2R5EQ16537 467 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 AAK1Q2M2I8 961 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 ALFQ53S48 1182 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 C1orf228Q6PIY5 440 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 TMCO3Q6UWJ1 677 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 SLC13A5Q86YT5 568 aaPredicted RBP15.19■□□□□ 0.02
CSRP1-201ENST00000340006 RSAD2Q8WXG1 361 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 IRF7Q92985 503 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 ARHGEF4Q9NR80 690 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 SPHK2Q9NRA0 654 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 DONSONQ9NYP3 566 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 EFR3BQ9Y2G0 817 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 HEY1Q9Y5J3 304 aa15.19■□□□□ 0.02
CSRP1-201ENST00000340006 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.18■□□□□ 0.02
CSRP1-201ENST00000340006 EFCAB8A8MWE9 144 aa15.18■□□□□ 0.02
CSRP1-201ENST00000340006 H0Y626 953 aa15.18■□□□□ 0.02
CSRP1-201ENST00000340006 IL9P15248 144 aa15.18■□□□□ 0.02
CSRP1-201ENST00000340006 RHOQP17081 205 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms