RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ARCQ7LC44 396 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 PHLDB2Q86SQ0 1253 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 WFIKKN2Q8TEU8 576 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 RLN3Q8WXF3 142 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 AGPAT1Q99943 283 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 C11orf70Q9BRQ4 267 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 CIPCQ9C0C6 399 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 DUSP15Q9H1R2 295 aaPredicted RBP15.79■□□□□ 0.12
PRKN-201ENST00000338468 ARHGEF38Q9NXL2 777 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 RRN3Q9NYV6 651 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 MYO6Q9UM54 1294 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 SDK1Q7Z5N4 2213 aa15.79■□□□□ 0.12
PRKN-201ENST00000338468 CNOT1A5YKK6 2376 aaKnown RBP15.78■□□□□ 0.12
PRKN-201ENST00000338468 LRRC53A6NM62 1247 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 NPC1O15118 1278 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 TIMM44O43615 452 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 LUC7L3O95232 432 aaKnown RBP15.78■□□□□ 0.12
PRKN-201ENST00000338468 GJB6O95452 261 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 SERPINC1P01008 464 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 FERP16591 822 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 NDUFV2P19404 249 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 ABCB4P21439 1286 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 GGCXP38435 758 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 P2RY2P41231 377 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 IRAK1P51617 712 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 USP39Q53GS9 565 aaKnown RBP15.78■□□□□ 0.12
PRKN-201ENST00000338468 MBLAC2Q68D91 279 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 SDE2Q6IQ49 451 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 FBXL22Q6P050 247 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 C14orf80Q86SX3 495 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 CIR1Q86X95 450 aaPredicted RBP15.78■□□□□ 0.12
PRKN-201ENST00000338468 PHF13Q86YI8 300 aaPredicted RBP15.78■□□□□ 0.12
PRKN-201ENST00000338468 MFN1Q8IWA4 741 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 AHI1Q8N157 1196 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 EMC1Q8N766 993 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 MSANTD4Q8NCY6 345 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 JOSD2Q8TAC2 188 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 CYB5D2Q8WUJ1 264 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 UCMAQ8WVF2 138 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 RNF34Q969K3 372 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 IGSF8Q969P0 613 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 CFAP57Q96MR6 1250 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 SLC6A17Q9H1V8 727 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 METTL5Q9NRN9 209 aaKnown RBP15.78■□□□□ 0.12
PRKN-201ENST00000338468 TMPRSS4Q9NRS4 437 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 SLC12A6Q9UHW9 1150 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 MBD1Q9UIS9 605 aaPredicted RBP15.78■□□□□ 0.12
PRKN-201ENST00000338468 STAP1Q9ULZ2 295 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 HS3ST4Q9Y661 456 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 RALGAPA1Q6GYQ0 2036 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 CEP295Q9C0D2 2601 aa15.78■□□□□ 0.12
PRKN-201ENST00000338468 CKAP5Q14008 2032 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 PLXND1Q9Y4D7 1925 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 TCRBV5S1A1TA0A578 114 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 F5H5T6 163 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 PAGE1O75459 146 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 CAVIN2O95810 425 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 LIMK1P53667 647 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 GSCP56915 257 aaPredicted RBP15.77■□□□□ 0.12
PRKN-201ENST00000338468 AUHQ13825 339 aaKnown RBP15.77■□□□□ 0.12
PRKN-201ENST00000338468 RAB6CQ53S08 254 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 MON1BQ7L1V2 547 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 ZNF683Q8IZ20 524 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 CARNMT1Q8N4J0 409 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 C12orf50Q8NA57 414 aaPredicted RBP15.77■□□□□ 0.12
PRKN-201ENST00000338468 TTC17Q96AE7 1141 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 MYO19Q96H55 970 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 LOXL4Q96JB6 756 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 RAB6CQ9H0N0 254 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 TMEM245Q9H330 911 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 CD93Q9NPY3 652 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 BCCIPQ9P287 314 aaKnown RBP eCLIP15.77■□□□□ 0.12
PRKN-201ENST00000338468 SNX10Q9Y5X0 201 aa15.77■□□□□ 0.12
PRKN-201ENST00000338468 ABCA7Q8IZY2 2146 aa15.77■□□□□ 0.11
PRKN-201ENST00000338468 C2CD4BA6NLJ0 364 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 ENDOD1O94919 500 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 EPN2O95208 641 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 DLDP09622 509 aaKnown RBP15.76■□□□□ 0.11
PRKN-201ENST00000338468 HLA-EP13747 358 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 PMLP29590 882 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 NSFP46459 744 aaKnown RBP15.76■□□□□ 0.11
PRKN-201ENST00000338468 DEUP1Q05D60 604 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 CCDC14Q49A88 953 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 C5orf22Q49AR2 442 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 BRMS1LQ5PSV4 323 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 CCAR2Q8N163 923 aaKnown RBP15.76■□□□□ 0.11
PRKN-201ENST00000338468 ZNF557Q8N988 423 aaPredicted RBP15.76■□□□□ 0.11
PRKN-201ENST00000338468 MRGPRX1Q96LB2 322 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 MKRN2Q9H000 416 aaKnown RBP15.76■□□□□ 0.11
PRKN-201ENST00000338468 TKTL2Q9H0I9 626 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 WDCPQ9H6R7 721 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 TAS2R14Q9NYV8 317 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 AIPL1Q9NZN9 384 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 ADAM22Q9P0K1 906 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 VANGL2Q9ULK5 521 aa15.76■□□□□ 0.11
PRKN-201ENST00000338468 TYW5A2RUC4 315 aaKnown RBP15.75■□□□□ 0.11
PRKN-201ENST00000338468 F9P00740 461 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 RDXP35241 583 aaKnown RBP15.75■□□□□ 0.11
PRKN-201ENST00000338468 CSKP41240 450 aa15.75■□□□□ 0.11
PRKN-201ENST00000338468 PRKCIP41743 596 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms