RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 PCDH18Q9HCL0 1135 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 TCF7L2Q9NQB0 619 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 SLC17A6Q9P2U8 582 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 RNF11Q9Y3C5 154 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 A0A1B0GTW7 788 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 CD1EP15812 388 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 ARL2P36404 184 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 MAGEA10P43363 369 aaPredicted RBP16.66■□□□□ 0.26
UPK3B-202ENST00000334348 CEACAM7Q14002 265 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 RAB6CQ53S08 254 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 FAM102AQ5T9C2 384 aaPredicted RBP16.66■□□□□ 0.26
UPK3B-202ENST00000334348 VSIG10LQ86VR7 867 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 CDKL3Q8IVW4 592 aaPredicted RBP16.66■□□□□ 0.26
UPK3B-202ENST00000334348 PGAM4Q8N0Y7 254 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 PDCD6IPQ8WUM4 868 aaKnown RBP16.66■□□□□ 0.26
UPK3B-202ENST00000334348 OR52B2Q96RD2 323 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 RAB6CQ9H0N0 254 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 XYLT2Q9H1B5 865 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 PDZD7Q9H5P4 517 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 TMEM165Q9HC07 324 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 RRN3Q9NYV6 651 aa16.66■□□□□ 0.26
UPK3B-202ENST00000334348 SBF1O95248 1867 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 WDR27A2RRH5 827 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 SLC22A2O15244 555 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 MAP3K6O95382 1288 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 H6PDO95479 791 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 HSPA4LO95757 839 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 ME2P23368 584 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 VARSP26640 1264 aaKnown RBP16.65■□□□□ 0.26
UPK3B-202ENST00000334348 CCND2P30279 289 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 SLC10A2Q12908 348 aaPredicted RBP16.65■□□□□ 0.26
UPK3B-202ENST00000334348 CYTH1Q15438 398 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 SLC44A4Q53GD3 710 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 PPM1JQ5JR12 505 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 ABHD15Q6UXT9 468 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 PCDH19Q8TAB3 1148 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 RSPH1Q8WYR4 309 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 TMIGD2Q96BF3 282 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 OXCT2Q9BYC2 517 aaPredicted RBP16.65■□□□□ 0.26
UPK3B-202ENST00000334348 SLC38A10Q9HBR0 1119 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 ARHGEF38Q9NXL2 777 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 RNF181Q9P0P0 153 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 PAIP2BQ9ULR5 123 aaKnown RBP16.65■□□□□ 0.26
UPK3B-202ENST00000334348 C2CD4BA6NLJ0 364 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 TMEM114B3SHH9 223 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 NUP107P57740 925 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 SEMA5AQ13591 1074 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 PPP2R5DQ14738 602 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 BOLA3Q53S33 107 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 PPM1LQ5SGD2 360 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 C9orf131Q5VYM1 1079 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 PATL1Q86TB9 770 aaKnown RBP16.65■□□□□ 0.26
UPK3B-202ENST00000334348 SETD3Q86TU7 594 aaPredicted RBP16.65■□□□□ 0.26
UPK3B-202ENST00000334348 FAM151AQ8WW52 585 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 RXFP2Q8WXD0 754 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 OSBPL6Q9BZF3 934 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 JPH1Q9HDC5 661 aaPredicted RBP16.65■□□□□ 0.26
UPK3B-202ENST00000334348 EPS15L1Q9UBC2 864 aa16.65■□□□□ 0.26
UPK3B-202ENST00000334348 TBC1D12O60347 775 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 PDGFRAP16234 1089 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 PROZP22891 400 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 TYK2P29597 1187 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 MSX2P35548 267 aaPredicted RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 ACTR2P61160 394 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 TUBA4AP68366 448 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 TMEM62Q0P6H9 643 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 DPYSQ14117 519 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 STILQ15468 1287 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 C15orf59Q2T9L4 293 aaPredicted RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 MGAT5BQ3V5L5 792 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 TRNP1Q6NT89 227 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 CPSF7Q8N684 471 aaKnown RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 TDRD5Q8NAT2 981 aaKnown RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 LRRN4Q8WUT4 740 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 ZNF597Q96LX8 424 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 KLHL32Q96NJ5 620 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 NUF2Q9BZD4 464 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 LIN28AQ9H9Z2 209 aaKnown RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 HEMK1Q9Y5R4 338 aaPredicted RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 C7orf72A4D263 438 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 H3BNH8 94 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 ACOT8O14734 319 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 SUPT3HO75486 399 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 RNASEH2AO75792 299 aaKnown RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 MLNP12872 115 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 PKNOX1P55347 436 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 SP4Q02446 784 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 PDAP1Q13442 181 aaKnown RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 ZPBP2Q6X784 338 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 VPS33BQ9H267 617 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 MTMR10Q9NXD2 777 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 TDRKHQ9Y2W6 561 aaKnown RBP16.64■□□□□ 0.25
UPK3B-202ENST00000334348 PSAT1Q9Y617 370 aa16.64■□□□□ 0.25
UPK3B-202ENST00000334348 NOP56O00567 594 aaKnown RBP16.63■□□□□ 0.25
UPK3B-202ENST00000334348 CFLARO15519 480 aa16.63■□□□□ 0.25
UPK3B-202ENST00000334348 MICAL2O94851 1124 aa16.63■□□□□ 0.25
UPK3B-202ENST00000334348 NR3C2P08235 984 aa16.63■□□□□ 0.25
UPK3B-202ENST00000334348 EPHA3P29320 983 aa16.63■□□□□ 0.25
UPK3B-202ENST00000334348 ADSLP30566 484 aaPredicted RBP16.63■□□□□ 0.25
UPK3B-202ENST00000334348 PHEXP78562 749 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms