RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 VPS50Q96JG6 964 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 SPATA13Q96N96 652 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 PDZD7Q9H5P4 517 aa13.3□□□□□ -0.28
VSTM4-202ENST00000332853 DHX33Q9H6R0 707 aaKnown RBP13.3□□□□□ -0.28
VSTM4-202ENST00000332853 TMEM191CA6NGB0 347 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 CKBP12277 381 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 ADSSP30520 456 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 NPY2RP49146 381 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 CCL23P55773 120 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 KLC1Q07866 573 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 APTXQ7Z2E3 356 aaKnown RBP13.29□□□□□ -0.28
VSTM4-202ENST00000332853 THRAP10827 490 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 PKN3Q6P5Z2 889 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 MIER2Q8N344 545 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 CDHR5Q9HBB8 845 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 PCDHA11Q9Y5I1 949 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 DOT1LQ8TEK3 1739 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 RASSF10A6NK89 507 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 ZSCAN9O15535 394 aaPredicted RBP13.29□□□□□ -0.28
VSTM4-202ENST00000332853 HDAC4P56524 1084 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 DDR2Q16832 855 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 DUSP28Q4G0W2 176 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 XYLT1Q86Y38 959 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 CNDP1Q96KN2 507 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 MARCH2Q9P0N8 246 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 KATNA1O75449 491 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 SOAT1P35610 550 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 ZNF280AP59817 542 aaPredicted RBP13.29□□□□□ -0.28
VSTM4-202ENST00000332853 MON1BQ7L1V2 547 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 GLT6D1Q7Z4J2 308 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 PSTKQ8IV42 348 aaKnown RBP13.29□□□□□ -0.28
VSTM4-202ENST00000332853 RASGEF1CQ8N431 466 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 SIX2Q9NPC8 291 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 HPS4Q9NQG7 708 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 NCKIPSDQ9NZQ3 722 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 SFMBT1Q9UHJ3 866 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 CDH9Q9ULB4 789 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 CLCA2Q9UQC9 943 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 NT5C1B-RDH14C9J2C7 533 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 NFKBIEO00221 500 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 PRKAR2AP13861 404 aaKnown RBP13.29□□□□□ -0.28
VSTM4-202ENST00000332853 NFKB1P19838 968 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 GRK2P25098 689 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 VHLP40337 213 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 KPNA1P52294 538 aaPredicted RBP13.29□□□□□ -0.28
VSTM4-202ENST00000332853 RABGGTBP53611 331 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 ELAVL2Q12926 359 aaKnown RBP13.29□□□□□ -0.28
VSTM4-202ENST00000332853 RGMBQ6NW40 437 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 SLC41A1Q8IVJ1 513 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 MYO1HQ8N1T3 1032 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 CCDC126Q96EE4 140 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 OXNAD1Q96HP4 312 aaPredicted RBP13.29□□□□□ -0.28
VSTM4-202ENST00000332853 NEUROG2Q9H2A3 272 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 FAM105AQ9NUU6 356 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 PCDHB12Q9Y5F1 795 aa13.29□□□□□ -0.28
VSTM4-202ENST00000332853 FOXO6A8MYZ6 492 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 FCHO1O14526 889 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 DNAJC8O75937 253 aaPredicted RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 ELNP15502 786 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 CHRNB2P17787 502 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 KLRC2P26717 231 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 IFNA8P32881 189 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 AARS2Q5JTZ9 985 aaKnown RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 SPDYCQ5MJ68 293 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 TPGS1Q6ZTW0 290 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 C1orf127Q8N9H9 656 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 CEP19Q96LK0 163 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 THUMPD3Q9BV44 507 aaKnown RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 RNF208Q9H0X6 261 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 YY1AP1Q9H869 796 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 APOBEC3GQ9HC16 384 aaKnown RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 CD86P42081 329 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 MMP13P45452 471 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 TTLL9Q3SXZ7 439 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 HSFY1Q96LI6 401 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 ZFP42Q96MM3 310 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 PRDM12Q9H4Q4 367 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 XPNPEP1Q9NQW7 623 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 B4GALT4O60513 344 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 RTN3O95197 1032 aaPredicted RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 ATP6V1G2O95670 118 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 RBP1P09455 135 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 PTPN4P29074 926 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 MBTD1Q05BQ5 628 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 MREGQ8N565 214 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 ECSITQ9BQ95 431 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 TSPAN1O60635 241 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 SERPINE1P05121 402 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 KRT16P08779 473 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 MMP8P22894 467 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 FMO4P31512 558 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 CCDC153Q494R4 210 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 TCHHL1Q5QJ38 904 aaPredicted RBP13.28□□□□□ -0.28
VSTM4-202ENST00000332853 KIRREL3Q8IZU9 778 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 CNPY4Q8N129 248 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 LRRC15Q8TF66 581 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 OTULINQ96BN8 352 aa13.28□□□□□ -0.28
VSTM4-202ENST00000332853 DPEP3Q9H4B8 488 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms