RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 KBTBD7Q8WVZ9 684 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 CCT7Q99832 543 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 LIN28AQ9H9Z2 209 aaKnown RBP18.34■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF302Q9NR11 478 aa18.34■□□□□ 0.53
PRKCB-202ENST00000321728 RSL24D1Q9UHA3 163 aaKnown RBP18.34■□□□□ 0.53
PRKCB-202ENST00000321728 FAF1Q9UNN5 650 aaPredicted RBP18.34■□□□□ 0.53
PRKCB-202ENST00000321728 PSMC3P17980 439 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 MS4A2Q01362 244 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 NIPAL4Q0D2K0 466 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 GRM1Q13255 1194 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF423Q2M1K9 1284 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 KLHL35Q6PF15 583 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 CMC1Q7Z7K0 106 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF554Q86TJ5 538 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 TICAM1Q8IUC6 712 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 TMEM126BQ8IUX1 230 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 TDRD5Q8NAT2 981 aaKnown RBP18.33■□□□□ 0.53
PRKCB-202ENST00000321728 NLRP7Q8WX94 980 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 AKT1S1Q96B36 256 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 ATXN7L3BQ96GX2 97 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 FERMT1Q9BQL6 677 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 TMEM134Q9H6X4 195 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 WDR55Q9H6Y2 383 aaPredicted RBP18.33■□□□□ 0.53
PRKCB-202ENST00000321728 HEMK1Q9Y5R4 338 aaPredicted RBP18.33■□□□□ 0.53
PRKCB-202ENST00000321728 NR2E3Q9Y5X4 410 aa18.33■□□□□ 0.53
PRKCB-202ENST00000321728 ZNF646O15015 1829 aaPredicted RBP18.33■□□□□ 0.53
PRKCB-202ENST00000321728 MYO18AQ92614 2054 aaKnown RBP18.33■□□□□ 0.52
PRKCB-202ENST00000321728 RGSL1A5PLK6 1076 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 TCF7P36402 384 aaPredicted RBP18.33■□□□□ 0.52
PRKCB-202ENST00000321728 GBE1Q04446 702 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 ADRM1Q16186 407 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 NRF1Q16656 503 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 BOLA3Q53S33 107 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 SLC9A4Q6AI14 798 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 C4orf22Q6V702 233 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 ZPBP2Q6X784 338 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 TSPAN14Q8NG11 270 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 RCN3Q96D15 328 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 ANKRD36BP1Q96IX9 119 aa18.33■□□□□ 0.52
PRKCB-202ENST00000321728 MRPL4Q9BYD3 311 aaKnown RBP18.33■□□□□ 0.52
PRKCB-202ENST00000321728 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
PRKCB-202ENST00000321728 XPO1O14980 1071 aaKnown RBP18.32■□□□□ 0.52
PRKCB-202ENST00000321728 OGTO15294 1046 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 GCATO75600 419 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 ALDH1A2O94788 518 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 SLC10A2Q12908 348 aaPredicted RBP18.32■□□□□ 0.52
PRKCB-202ENST00000321728 INSCQ1MX18 579 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 METTL21CQ5VZV1 264 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 NAPRTQ6XQN6 538 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 HEXIM2Q96MH2 286 aaKnown RBP18.32■□□□□ 0.52
PRKCB-202ENST00000321728 HAUS8Q9BT25 410 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 TRPC5Q9UL62 973 aaPredicted RBP18.32■□□□□ 0.52
PRKCB-202ENST00000321728 AMHP03971 560 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 HOXC6P09630 235 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 TCN1P20061 433 aaPredicted RBP18.32■□□□□ 0.52
PRKCB-202ENST00000321728 GPD2P43304 727 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 CLCN2P51788 898 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 CEACAM7Q14002 265 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 USP41Q3LFD5 358 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 PIGGQ5H8A4 983 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 PRAMEF18Q5VWM3 479 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 FAM183BPQ6ZVS7 135 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 CDR2LQ86X02 465 aaPredicted RBP18.32■□□□□ 0.52
PRKCB-202ENST00000321728 ADAM32Q8TC27 787 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 NSUN6Q8TEA1 469 aaKnown RBP18.32■□□□□ 0.52
PRKCB-202ENST00000321728 GFM2Q969S9 779 aaKnown RBP18.32■□□□□ 0.52
PRKCB-202ENST00000321728 EME1Q96AY2 570 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 ELOVL4Q9GZR5 314 aa18.32■□□□□ 0.52
PRKCB-202ENST00000321728 COQ9O75208 318 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 NELFEP18615 380 aaKnown RBP18.31■□□□□ 0.52
PRKCB-202ENST00000321728 MGAT1P26572 445 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 SFSWAPQ12872 951 aaKnown RBP18.31■□□□□ 0.52
PRKCB-202ENST00000321728 PPP2R5DQ14738 602 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 CYS1Q717R9 158 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 PDCD6IPQ8WUM4 868 aaKnown RBP18.31■□□□□ 0.52
PRKCB-202ENST00000321728 LPAR1Q92633 364 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 TMIGD2Q96BF3 282 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 SNRNP25Q9BV90 132 aaKnown RBP18.31■□□□□ 0.52
PRKCB-202ENST00000321728 STX16-NPEPL1H3BU86 382 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 ERVK-10P10266 1014 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 GLDCP23378 1020 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 FSTL1Q12841 308 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 SURF1Q15526 300 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 CCDC14Q49A88 953 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 STEAP4Q687X5 459 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 KCNT2Q6UVM3 1135 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 CES3Q6UWW8 571 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 LPCAT2Q7L5N7 544 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 TMEM165Q9HC07 324 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 ACSS2Q9NR19 701 aa18.31■□□□□ 0.52
PRKCB-202ENST00000321728 CPSF3Q9UKF6 684 aaKnown RBP18.31■□□□□ 0.52
PRKCB-202ENST00000321728 TDRKHQ9Y2W6 561 aaKnown RBP18.31■□□□□ 0.52
PRKCB-202ENST00000321728 ME2P23368 584 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 CYP2F1P24903 491 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 EPHA3P29320 983 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 ART3Q13508 389 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 CCDC153Q494R4 210 aa18.3■□□□□ 0.52
PRKCB-202ENST00000321728 HEATR6Q6AI08 1181 aaKnown RBP18.3■□□□□ 0.52
PRKCB-202ENST00000321728 ERI1Q8IV48 349 aaKnown RBP18.3■□□□□ 0.52
PRKCB-202ENST00000321728 PLD6Q8N2A8 252 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms