RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 PTDSS1P48651 473 aaKnown RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 CCDC81Q6ZN84 652 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 MON1BQ7L1V2 547 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 CLEC4CQ8WTT0 213 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 KLHL5Q96PQ7 755 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 SMAD5Q99717 465 aaKnown RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 TMEM134Q9H6X4 195 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 COPS7BQ9H9Q2 264 aaPredicted RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 ARL8BQ9NVJ2 186 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 PNPOQ9NVS9 261 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 SLC8A2Q9UPR5 921 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 SNCAIPQ9Y6H5 919 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 BCL9LQ86UU0 1499 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 PRR5-ARHGAP8B1AHC4 643 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 C9JVG2 144 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 MSI1O43347 362 aaKnown RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 HNRNPCP07910 306 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 THRAP10827 490 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 RAG1P15918 1043 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 PPP3CCP48454 512 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 GEMP55040 296 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 KCNK10P57789 538 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 ARHGAP8P85298 464 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 LINC00523Q86TU6 105 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 CARNMT1Q8N4J0 409 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 DCBLD1Q8N8Z6 715 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 B3GALNT2Q8NCR0 500 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 AZIN2Q96A70 460 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 HAUS8Q9BT25 410 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 AAR2Q9Y312 384 aaKnown RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 CXCL11O14625 94 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 HCRTO43612 131 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 ALDH7A1P49419 539 aaKnown RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 CDH17Q12864 832 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 PLEKHA7Q6IQ23 1121 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 LRRC74BQ6ZQY2 392 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 LPCAT1Q8NF37 534 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 KCTD4Q8WVF5 259 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 B3GALT6Q96L58 329 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 ECSITQ9BQ95 431 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 TINF2Q9BSI4 451 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 DPEP3Q9H4B8 488 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 RNPEPL1Q9HAU8 725 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 PCDH18Q9HCL0 1135 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 SLC27A5Q9Y2P5 690 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 NID2Q14112 1375 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 HIST1H2AGP0C0S8 130 aaPredicted RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 HIST1H2ADP20671 130 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 PTGIRP43119 386 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 TRMT10BQ6PF06 316 aaKnown RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 C16orf59Q7L2K0 433 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 C11orf96Q7Z7L8 435 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 SLC41A1Q8IVJ1 513 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 GPC2Q8N158 579 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 NLGN2Q8NFZ4 835 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 PIWIL2Q8TC59 973 aaKnown RBP16.84■□□□□ 0.29
CLIP4-201ENST00000320081 WNT8BQ93098 351 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 HIST1H2AHQ96KK5 128 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 HIST1H2AJQ99878 128 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 C17orf80Q9BSJ5 609 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 H2AFJQ9BTM1 129 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 TRIM54Q9BYV2 358 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 RHBDL2Q9NX52 303 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 VPS28Q9UK41 221 aa16.84■□□□□ 0.29
CLIP4-201ENST00000320081 ALOX15BO15296 676 aa16.83■□□□□ 0.29
CLIP4-201ENST00000320081 INPP5AQ14642 412 aa16.83■□□□□ 0.29
CLIP4-201ENST00000320081 MRNIPQ6NTE8 343 aa16.83■□□□□ 0.29
CLIP4-201ENST00000320081 LDB1Q86U70 411 aaPredicted RBP16.83■□□□□ 0.29
CLIP4-201ENST00000320081 UNC5BQ8IZJ1 945 aa16.83■□□□□ 0.29
CLIP4-201ENST00000320081 HIC2Q96JB3 615 aa16.83■□□□□ 0.29
CLIP4-201ENST00000320081 EIF2AQ9BY44 585 aaKnown RBP16.83■□□□□ 0.29
CLIP4-201ENST00000320081 ZNF395Q9H8N7 513 aaPredicted RBP16.83■□□□□ 0.29
CLIP4-201ENST00000320081 POPDC2Q9HBU9 364 aa16.83■□□□□ 0.29
CLIP4-201ENST00000320081 TRMT6Q9UJA5 497 aaKnown RBP16.83■□□□□ 0.29
CLIP4-201ENST00000320081 ZNF214Q9UL59 606 aaPredicted RBP16.83■□□□□ 0.29
CLIP4-201ENST00000320081 MYH8P13535 1937 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 PGM3O95394 542 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 NDUFV1P49821 464 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 OASLQ15646 514 aaKnown RBP16.83■□□□□ 0.28
CLIP4-201ENST00000320081 EIF1ADQ8N9N8 165 aaKnown RBP16.83■□□□□ 0.28
CLIP4-201ENST00000320081 P2RY11Q96G91 374 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 DCUN1D1Q96GG9 259 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 GPR20Q99678 358 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 ZNF541Q9H0D2 1346 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 KIAA0100Q14667 2235 aaKnown RBP16.83■□□□□ 0.28
CLIP4-201ENST00000320081 A0A0A0MRY4 1105 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.83■□□□□ 0.28
CLIP4-201ENST00000320081 UGT1A9O60656 530 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 PLA2G6O60733 806 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 PYGLP06737 847 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 GRIA1P42261 906 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 CDKN2BP42772 138 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 CD151P48509 253 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 FKBP1AP62942 108 aaKnown RBP16.83■□□□□ 0.28
CLIP4-201ENST00000320081 ZNF177Q13360 481 aaPredicted RBP16.83■□□□□ 0.28
CLIP4-201ENST00000320081 MILR1Q7Z6M3 343 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 SPATA13Q96N96 652 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 UGT1A7Q9HAW7 530 aa16.83■□□□□ 0.28
CLIP4-201ENST00000320081 UGT1A10Q9HAW8 530 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms