RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 CPXM1Q96SM3 734 aa16.11■□□□□ 0.17
FOXR1-201ENST00000317011 GTPBP2Q9BX10 602 aaKnown RBP16.11■□□□□ 0.17
FOXR1-201ENST00000317011 RSPH9Q9H1X1 276 aaPredicted RBP16.11■□□□□ 0.17
FOXR1-201ENST00000317011 OSGEPQ9NPF4 335 aa16.11■□□□□ 0.17
FOXR1-201ENST00000317011 STIM2Q9P246 746 aa16.11■□□□□ 0.17
FOXR1-201ENST00000317011 AJAP1Q9UKB5 411 aaPredicted RBP16.11■□□□□ 0.17
FOXR1-201ENST00000317011 KNL1Q8NG31 2342 aa16.11■□□□□ 0.17
FOXR1-201ENST00000317011 FAM221BA6H8Z2 402 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 CAPN9O14815 690 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 BCAT2O15382 392 aaPredicted RBP16.1■□□□□ 0.17
FOXR1-201ENST00000317011 LUC7L3O95232 432 aaKnown RBP16.1■□□□□ 0.17
FOXR1-201ENST00000317011 PRKCSHP14314 528 aaPredicted RBP16.1■□□□□ 0.17
FOXR1-201ENST00000317011 TACR2P21452 398 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 ERCC5P28715 1186 aaPredicted RBP16.1■□□□□ 0.17
FOXR1-201ENST00000317011 CSKP41240 450 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 PLK1P53350 603 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 HNRNPDQ14103 355 aaKnown RBP16.1■□□□□ 0.17
FOXR1-201ENST00000317011 MAN2A1Q16706 1144 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 ARHGAP44Q17R89 818 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 HNRNPA1L2Q32P51 320 aaKnown RBP16.1■□□□□ 0.17
FOXR1-201ENST00000317011 EFHC1Q5JVL4 640 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 MIIPQ5JXC2 388 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 C9orf64Q5T6V5 341 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 FAM71AQ8IYT1 594 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 CFAP52Q8N1V2 620 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 OR2I1PQ8NGU4 316 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 PPP1R13BQ96KQ4 1090 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 ORAI3Q9BRQ5 295 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 C6orf106Q9H6K1 298 aaPredicted RBP16.1■□□□□ 0.17
FOXR1-201ENST00000317011 KIAA1522Q9P206 1035 aaPredicted RBP16.1■□□□□ 0.17
FOXR1-201ENST00000317011 DNAJC12Q9UKB3 198 aa16.1■□□□□ 0.17
FOXR1-201ENST00000317011 TARSL2A2RTX5 802 aaKnown RBP16.09■□□□□ 0.17
FOXR1-201ENST00000317011 KRT37O76014 449 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 TOP3BO95985 862 aaKnown RBP16.09■□□□□ 0.17
FOXR1-201ENST00000317011 SRPRAP08240 638 aaKnown RBP16.09■□□□□ 0.17
FOXR1-201ENST00000317011 ZNF883P0CG24 379 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 VASPP50552 380 aaPredicted RBP16.09■□□□□ 0.17
FOXR1-201ENST00000317011 FAM193AP78312 1265 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 PTK2Q05397 1052 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 KCNMA1Q12791 1236 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 GRIK2Q13002 908 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 ST3GAL2Q16842 350 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 C5orf22Q49AR2 442 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 CT47A1Q5JQC4 288 aaPredicted RBP16.09■□□□□ 0.17
FOXR1-201ENST00000317011 PITRM1Q5JRX3 1037 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 MMS22LQ6ZRQ5 1243 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 RBM43Q6ZSC3 357 aaKnown RBP16.09■□□□□ 0.17
FOXR1-201ENST00000317011 USP30Q70CQ3 517 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 LGI2Q8N0V4 545 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 DEFB106AQ8N104 65 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 ZNF397Q8NF99 534 aaPredicted RBP16.09■□□□□ 0.17
FOXR1-201ENST00000317011 FAM129BQ96TA1 746 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 NDST4Q9H3R1 872 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 MTG2Q9H4K7 406 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 SGK2Q9HBY8 427 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 EIF2B4Q9UI10 523 aaKnown RBP16.09■□□□□ 0.17
FOXR1-201ENST00000317011 SCML1Q9UN30 329 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 ERVW-1Q9UQF0 538 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 ITIH6Q6UXX5 1313 aa16.09■□□□□ 0.17
FOXR1-201ENST00000317011 SYCE3A1L190 88 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 CBFA2T3O75081 653 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 APOEP02649 317 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 PROS1P07225 676 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 SLC2A3P11169 496 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 CDH5P33151 784 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-201ENST00000317011 MTIF2P46199 727 aaKnown RBP16.08■□□□□ 0.16
FOXR1-201ENST00000317011 CDK17Q00537 523 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 SLC12A1Q13621 1099 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 ZSCAN23Q3MJ62 389 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 VWA3BQ502W6 1294 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 RAP1GAP2Q684P5 730 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 OLFML1Q6UWY5 402 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 C11orf57Q6ZUT1 292 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-201ENST00000317011 APCDD1Q8J025 514 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 CARNMT1Q8N4J0 409 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 ATP6V0D2Q8N8Y2 350 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 KDF1Q8NAX2 398 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-201ENST00000317011 NT5C3BQ969T7 300 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 ALG14Q96F25 216 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 NAA15Q9BXJ9 866 aaKnown RBP16.08■□□□□ 0.16
FOXR1-201ENST00000317011 BTBD1Q9H0C5 482 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 SLC12A6Q9UHW9 1150 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 SLCO3A1Q9UIG8 710 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-201ENST00000317011 SLCO1B1Q9Y6L6 691 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 USP24Q9UPU5 2620 aa16.08■□□□□ 0.16
FOXR1-201ENST00000317011 MUC22E2RYF6 1773 aaPredicted RBP16.08■□□□□ 0.16
FOXR1-201ENST00000317011 NUMA1Q14980 2115 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 ASPMQ8IZT6 3477 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 TYW5A2RUC4 315 aaKnown RBP16.07■□□□□ 0.16
FOXR1-201ENST00000317011 MEI4A8MW99 385 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 SH3BP5O60239 455 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 HSF2BPO75031 334 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 SIN3BO75182 1162 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 MOCS2O96007 188 aaPredicted RBP16.07■□□□□ 0.16
FOXR1-201ENST00000317011 DNTTP04053 509 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 CCR1P32246 355 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 USP8P40818 1118 aa16.07■□□□□ 0.16
FOXR1-201ENST00000317011 CTSOP43234 321 aaPredicted RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms