RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ATP6V1G3Q96LB4 118 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 MYRFLQ96LU7 910 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 SPATA13Q96N96 652 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 KLC2Q9H0B6 622 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 RXFP1Q9HBX9 757 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.99■□□□□ 0.15
LSM6-201ENST00000296581 MRPL17Q9NRX2 175 aaKnown RBP15.99■□□□□ 0.15
LSM6-201ENST00000296581 MARCH2Q9P0N8 246 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 MAFFQ9ULX9 164 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 MAGED2Q9UNF1 606 aaPredicted RBP15.99■□□□□ 0.15
LSM6-201ENST00000296581 YIPF1Q9Y548 306 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 KLHL33A6NCF5 533 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 GOLGA6CA6NDK9 693 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 FGF18O76093 207 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 ACSL3O95573 720 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 GOLGA6DP0CG33 693 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 CSH1P0DML2 217 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 CSH2P0DML3 217 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 MX2P20592 715 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 LIG3P49916 1009 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 ARL4CP56559 192 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 PPIDQ08752 370 aaKnown RBP15.99■□□□□ 0.15
LSM6-201ENST00000296581 C10orf120Q5SQS8 335 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 PSRC1Q6PGN9 363 aaPredicted RBP15.99■□□□□ 0.15
LSM6-201ENST00000296581 NETO2Q8NC67 525 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 CDK5RAP1Q96SZ6 601 aaKnown RBP15.99■□□□□ 0.15
LSM6-201ENST00000296581 FERMT1Q9BQL6 677 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 ZBP1Q9H171 429 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 CYP4F11Q9HBI6 524 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 LRRC4CQ9HCJ2 640 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 GOLGA6AQ9NYA3 693 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 CXXC1Q9P0U4 656 aaPredicted RBP15.99■□□□□ 0.15
LSM6-201ENST00000296581 INSL6Q9Y581 213 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 NUP205Q92621 2012 aa15.99■□□□□ 0.15
LSM6-201ENST00000296581 HMGB1P1B2RPK0 211 aaPredicted RBP15.98■□□□□ 0.15
LSM6-201ENST00000296581 GOLGA8MH3BSY2 632 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 TLR5O60602 858 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 MOCS2O96007 188 aaPredicted RBP15.98■□□□□ 0.15
LSM6-201ENST00000296581 APOEP02649 317 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 ABHD2P08910 425 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 SRGAP2BP0DMP2 458 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 CREMQ03060 361 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 RING1Q06587 406 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 AP1B1Q10567 949 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 KRT71Q3SY84 523 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 AGBL2Q5U5Z8 902 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 PIK3R6Q5UE93 754 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 FBXW10Q5XX13 1052 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 CROCCP2Q86T23 111 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 TCEAL8Q8IYN2 117 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
LSM6-201ENST00000296581 AUTS2Q8WXX7 1259 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 HDAC11Q96DB2 347 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 TRMT2BQ96GJ1 504 aaKnown RBP15.98■□□□□ 0.15
LSM6-201ENST00000296581 C9orf72Q96LT7 481 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 TTC25Q96NG3 672 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 CATSPERBQ9H7T0 1116 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 CCSER2Q9H7U1 834 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 ETNK1Q9HBU6 452 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 STK10O94804 968 aaKnown RBP15.98■□□□□ 0.15
LSM6-201ENST00000296581 METTL18O95568 372 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 WASHC5Q12768 1159 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 ANKRD20A2Q5SQ80 823 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 FNBP1LQ5T0N5 605 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 ANKRD20A1Q5TYW2 823 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 ANKRD20A3Q5VUR7 823 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 RWDD4Q6NW29 188 aaKnown RBP15.98■□□□□ 0.15
LSM6-201ENST00000296581 PPP1R21Q6ZMI0 780 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 ZNF683Q8IZ20 524 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 ATP6V0D2Q8N8Y2 350 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 CCNYQ8ND76 341 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 FRMD8Q9BZ67 464 aaPredicted RBP15.98■□□□□ 0.15
LSM6-201ENST00000296581 NR2E3Q9Y5X4 410 aa15.98■□□□□ 0.15
LSM6-201ENST00000296581 DOCK4Q8N1I0 1966 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 MKI67P46013 3256 aaKnown RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 WASH4PA8MWX3 477 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 E9PAM4 449 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 RNF103O00237 685 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 OPHN1O60890 802 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 CTSAP10619 480 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 DNAJB2P25686 324 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 ELF1P32519 619 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 ALDH1A3P47895 512 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 KPNA1P52294 538 aaPredicted RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 PDIA2Q13087 525 aaKnown RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 FASTKD3Q14CZ7 662 aaKnown RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 FAM182AQ5T1J6 154 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 ARHGEF18Q6ZSZ5 1173 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 C14orf80Q86SX3 495 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 MIB1Q86YT6 1006 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 UHMK1Q8TAS1 419 aaKnown RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 HERVK_113Q902F9 699 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 BTN2A3PQ96KV6 586 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 ROPN1BQ9BZX4 212 aaPredicted RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 ROPN1Q9HAT0 212 aaPredicted RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 ZMYND8Q9ULU4 1186 aaPredicted RBP15.97■□□□□ 0.15
LSM6-201ENST00000296581 SSX2IPQ9Y2D8 614 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 PLXNA4Q9HCM2 1894 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 SLC12A8A0AV02 714 aa15.97■□□□□ 0.15
LSM6-201ENST00000296581 ZNF840PA6NDX5 716 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms