RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 C9orf72Q96LT7 481 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 SPATA13Q96N96 652 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 FERMT1Q9BQL6 677 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 ETNK1Q9HBU6 452 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 LRRC4CQ9HCJ2 640 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 TRPM5Q9NZQ8 1165 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 VPS18Q9P253 973 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 DNMT3LQ9UJW3 386 aa23.51■■□□□ 1.35
PTX3-201ENST00000295927 ANAPC1Q9H1A4 1944 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 DOCK4Q8N1I0 1966 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 RNF103O00237 685 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 METTL18O95568 372 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 CXCL14O95715 111 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 SPATA31D3P0C874 917 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 MX2P20592 715 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 ATP5C1P36542 298 aaKnown RBP23.5■■□□□ 1.35
PTX3-201ENST00000295927 KPNA1P52294 538 aaPredicted RBP23.5■■□□□ 1.35
PTX3-201ENST00000295927 PPIDQ08752 370 aaKnown RBP23.5■■□□□ 1.35
PTX3-201ENST00000295927 SYCP2LQ5T4T6 812 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 ARHGEF18Q6ZSZ5 1173 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 SPATA31D4Q6ZUB0 917 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 TMC7Q7Z402 723 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 TADA2BQ86TJ2 420 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 CELF6Q96J87 481 aaKnown RBP23.5■■□□□ 1.35
PTX3-201ENST00000295927 BRD8Q9H0E9 1235 aa23.5■■□□□ 1.35
PTX3-201ENST00000295927 STK10O94804 968 aaKnown RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 EPHB3P54753 998 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 ARL4CP56559 192 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 WASHC5Q12768 1159 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 FNBP1LQ5T0N5 605 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 HECTD3Q5T447 861 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 DNAJB7Q7Z6W7 309 aaPredicted RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 HDAC11Q96DB2 347 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 TMBIM4Q9HC24 238 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 SEPT10Q9P0V9 454 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 VANGL2Q9ULK5 521 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 HBS1LQ9Y450 684 aaKnown RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 MYO18AQ92614 2054 aaKnown RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 GOLGA6L10A6NI86 522 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 MYZAPP0CAP1 466 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 CTNNB1P35222 781 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 BMPR1AP36894 532 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 GARSP41250 739 aaKnown RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 PDIA2Q13087 525 aaKnown RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 AUHQ13825 339 aaKnown RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 FASTKD3Q14CZ7 662 aaKnown RBP23.49■■□□□ 1.35
PTX3-201ENST00000295927 ZNF683Q8IZ20 524 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 PHACTR1Q9C0D0 580 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 MPP6Q9NZW5 540 aa23.49■■□□□ 1.35
PTX3-201ENST00000295927 ALOX15BO15296 676 aa23.48■■□□□ 1.35
PTX3-201ENST00000295927 TGM5O43548 720 aa23.48■■□□□ 1.35
PTX3-201ENST00000295927 MAGEA6P43360 314 aa23.48■■□□□ 1.35
PTX3-201ENST00000295927 HP1BP3Q5SSJ5 553 aaPredicted RBP23.48■■□□□ 1.35
PTX3-201ENST00000295927 DEPDC1BQ8WUY9 529 aa23.48■■□□□ 1.35
PTX3-201ENST00000295927 PSMG2Q969U7 264 aa23.48■■□□□ 1.35
PTX3-201ENST00000295927 CEP41Q9BYV8 373 aa23.48■■□□□ 1.35
PTX3-201ENST00000295927 NACA2Q9H009 215 aa23.48■■□□□ 1.35
PTX3-201ENST00000295927 ALG13Q9NP73 1137 aaKnown RBP23.48■■□□□ 1.35
PTX3-201ENST00000295927 LAMA2P24043 3122 aaKnown RBP23.48■■□□□ 1.35
PTX3-201ENST00000295927 KCNK1O00180 336 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 COCHO43405 550 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 OPHN1O60890 802 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 BANF1O75531 89 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 ZNF189O75820 626 aaPredicted RBP23.47■■□□□ 1.35
PTX3-201ENST00000295927 KCNQ1P51787 676 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 ERVFC1P60507 584 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 KRT71Q3SY84 523 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 MSS51Q4VC12 460 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 KLHDC10Q6PID8 442 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 ARHGAP12Q8IWW6 846 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 ZBED8Q8IZ13 594 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 LZTR1Q8N653 840 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 RTL3Q8N8U3 475 aaKnown RBP23.47■■□□□ 1.35
PTX3-201ENST00000295927 NDFIP2Q9NV92 336 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 APRTP07741 180 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 GYS2P54840 703 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 RAP1GAP2Q684P5 730 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 NUGGCQ68CJ6 796 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 LRRC31Q6UY01 552 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 CCDC13Q8IYE1 715 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 ZNF567Q8N184 647 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 KLHL5Q96PQ7 755 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 TCF25Q9BQ70 676 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 LBHD1Q9BQE6 289 aaPredicted RBP23.47■■□□□ 1.35
PTX3-201ENST00000295927 MTIF3Q9H2K0 278 aaKnown RBP23.47■■□□□ 1.35
PTX3-201ENST00000295927 CENPHQ9H3R5 247 aa23.47■■□□□ 1.35
PTX3-201ENST00000295927 GOLGA6CA6NDK9 693 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 WASH4PA8MWX3 477 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 E7ESA3 106 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 EIF3HO15372 352 aaKnown RBP eCLIP23.46■■□□□ 1.35
PTX3-201ENST00000295927 GOLGA6DP0CG33 693 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 KCTD16Q68DU8 428 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 LILRA6Q6PI73 481 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 PDIK1LQ8N165 341 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 EXOC4Q96A65 974 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 PRMT1Q99873 361 aaKnown RBP23.46■■□□□ 1.35
PTX3-201ENST00000295927 HTATIP2Q9BUP3 242 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 GOLGA6AQ9NYA3 693 aa23.46■■□□□ 1.35
PTX3-201ENST00000295927 PPARGC1AQ9UBK2 798 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms