RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 SCHIP1Q9P0W5 487 aaPredicted RBP18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 AIM2O14862 343 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 XPO1O14980 1071 aaKnown RBP18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 PGAM1P18669 254 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 C17orf80Q9BSJ5 609 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 ELOVL6Q9H5J4 265 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 EVA1BQ9NVM1 165 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 GJB6O95452 261 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 GP5P40197 560 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 STX5Q13190 355 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 SPANXN3Q5MJ09 141 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 SLC22A9Q8IVM8 553 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 MCOLN3Q8TDD5 553 aa18.1■□□□□ 0.49
CDC42EP3-201ENST00000295324 PJA2O43164 708 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZNF862O60290 1169 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 TBL1XO60907 577 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 RARAP10276 462 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 PRIM2P49643 509 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 MAMLD1Q13495 774 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 SYTL1Q8IYJ3 562 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZNF556Q9HAH1 456 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 WARS2Q9UGM6 360 aaKnown RBP18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZNF214Q9UL59 606 aaPredicted RBP18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 GOLGA8TH3BQL2 631 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 MEA1Q16626 185 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 PARP6Q2NL67 630 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 SH3D19Q5HYK7 790 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 CATSPER1Q8NEC5 780 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 CXorf40AQ8TE69 158 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 CAPN10Q9HC96 672 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 PEX10O60683 326 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 LGR5O75473 907 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 FAM107AO95990 144 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 BOP1Q14137 746 aaKnown RBP18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 KCNMB4Q86W47 210 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 HNRNPLLQ8WVV9 542 aaKnown RBP18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 JADE3Q92613 823 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 ABHD8Q96I13 439 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 CCT8L2Q96SF2 557 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 BBS2Q9BXC9 721 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 DHX33Q9H6R0 707 aaKnown RBP18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 ERBB2P04626 1255 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 KIAA1324Q6UXG2 1013 aaKnown RBP18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 FAM162AQ96A26 154 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 AHSPQ9NZD4 102 aa18.09■□□□□ 0.49
CDC42EP3-201ENST00000295324 CTSEP14091 401 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 MAPK9P45984 424 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 TARBP2Q15633 366 aaKnown RBP18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 STK40Q8N2I9 435 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 TNFRSF25Q93038 417 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 CCDC90BQ9GZT6 254 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 CYP4F12Q9HCS2 524 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 KLRG2A4D1S0 409 aaPredicted RBP18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 MGAT4DA6NG13 374 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 F8W810 466 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 TGFB1I1O43294 461 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 SKAP2O75563 359 aaPredicted RBP18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 MRPS5P82675 430 aaKnown RBP18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 ZC3H12BQ5HYM0 836 aaKnown RBP18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 SPATA20Q8TB22 786 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 RGS18Q9NS28 235 aa18.08■□□□□ 0.49
CDC42EP3-201ENST00000295324 ROBO1Q9Y6N7 1651 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 PDE2AO00408 941 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 IRAK1BP1Q5VVH5 260 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 MTSS1LQ765P7 747 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 PHF13Q86YI8 300 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 NPAS4Q8IUM7 802 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 DNAJC18Q9H819 358 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 SRRDQ9UH36 339 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 ANKRD26Q9UPS8 1709 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 RAD51BO15315 384 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 VAPBO95292 243 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 ADH1CP00326 375 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 KRT6AP02538 564 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 KRT6BP04259 564 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 KRT6CP48668 564 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 SERPINH1P50454 418 aaKnown RBP18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 ATAT1Q5SQI0 421 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 FAM46CQ5VWP2 391 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 AHCYL2Q96HN2 611 aaKnown RBP18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 RMND5AQ9H871 391 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 COL20A1Q9P218 1284 aa18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 MORC2Q9Y6X9 1032 aaPredicted RBP18.08■□□□□ 0.48
CDC42EP3-201ENST00000295324 SLCO1B7G3V0H7 640 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 MPOP05164 745 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 MGAT1P26572 445 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ELK3P41970 407 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 DUSP4Q13115 394 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ARSHQ5FYA8 562 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 GRTP1Q5TC63 336 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 WDR93Q6P2C0 686 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 SERAC1Q96JX3 654 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ATP13A3Q9H7F0 1226 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 GPR25O00155 361 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 GLI1P08151 1106 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 GRK2P25098 689 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 RBL1P28749 1068 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ARL2P36404 184 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 CDC16Q13042 620 aa18.07■□□□□ 0.48
CDC42EP3-201ENST00000295324 ZNF470Q6ECI4 717 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms