RNA–Protein interactions for RNA: ENST00000293968.11

CCNF-201, Transcript of cyclin F, humanhuman

TSL 1 (best)

Gene CCNF, Length 4,173 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-201ENST00000293968 TUBB3Q13509 450 aa15.08■□□□□ 0.01
CCNF-201ENST00000293968 TMEM132DQ14C87 1099 aa15.08■□□□□ 0.01
CCNF-201ENST00000293968 POTEAQ6S8J7 498 aa15.08■□□□□ 0.01
CCNF-201ENST00000293968 DCLK2Q8N568 766 aa15.08■□□□□ 0.01
CCNF-201ENST00000293968 BARX2Q9UMQ3 279 aaPredicted RBP15.08■□□□□ 0.01
CCNF-201ENST00000293968 LRRC37AA6NMS7 1700 aa15.08■□□□□ 0
CCNF-201ENST00000293968 STX16-NPEPL1H3BU86 382 aa15.08■□□□□ 0
CCNF-201ENST00000293968 RNF103O00237 685 aa15.08■□□□□ 0
CCNF-201ENST00000293968 FAM189A1O60320 539 aa15.08■□□□□ 0
CCNF-201ENST00000293968 B4GALT4O60513 344 aa15.08■□□□□ 0
CCNF-201ENST00000293968 FAM200BP0CF97 657 aa15.08■□□□□ 0
CCNF-201ENST00000293968 CD1EP15812 388 aa15.08■□□□□ 0
CCNF-201ENST00000293968 BNC2Q6ZN30 1099 aaPredicted RBP15.08■□□□□ 0
CCNF-201ENST00000293968 PLD6Q8N2A8 252 aaKnown RBP15.08■□□□□ 0
CCNF-201ENST00000293968 TRIML2Q8N7C3 387 aa15.08■□□□□ 0
CCNF-201ENST00000293968 KIF12Q96FN5 646 aa15.08■□□□□ 0
CCNF-201ENST00000293968 SORT1Q99523 831 aa15.08■□□□□ 0
CCNF-201ENST00000293968 SIKE1Q9BRV8 207 aa15.08■□□□□ 0
CCNF-201ENST00000293968 ANLNQ9NQW6 1124 aa15.08■□□□□ 0
CCNF-201ENST00000293968 STK32BQ9NY57 414 aa15.08■□□□□ 0
CCNF-201ENST00000293968 GGA3Q9NZ52 723 aa15.08■□□□□ 0
CCNF-201ENST00000293968 ATP5BP06576 529 aaKnown RBP15.08■□□□□ 0
CCNF-201ENST00000293968 POLBP06746 335 aa15.08■□□□□ 0
CCNF-201ENST00000293968 CYP3A5P20815 502 aa15.08■□□□□ 0
CCNF-201ENST00000293968 MPSTP25325 297 aa15.08■□□□□ 0
CCNF-201ENST00000293968 ARRB2P32121 409 aa15.08■□□□□ 0
CCNF-201ENST00000293968 RPL5P46777 297 aaKnown RBP15.08■□□□□ 0
CCNF-201ENST00000293968 IRF9Q00978 393 aa15.08■□□□□ 0
CCNF-201ENST00000293968 NADK2Q4G0N4 442 aa15.08■□□□□ 0
CCNF-201ENST00000293968 HSP90AA5PQ58FG0 334 aa15.08■□□□□ 0
CCNF-201ENST00000293968 CYP4V2Q6ZWL3 525 aaPredicted RBP15.08■□□□□ 0
CCNF-201ENST00000293968 RCN3Q96D15 328 aa15.08■□□□□ 0
CCNF-201ENST00000293968 DGCR14Q96DF8 476 aaKnown RBP15.08■□□□□ 0
CCNF-201ENST00000293968 TASP1Q9H6P5 420 aa15.08■□□□□ 0
CCNF-201ENST00000293968 SLC39A10Q9ULF5 831 aa15.08■□□□□ 0
CCNF-201ENST00000293968 SMIM31A0A1B0GVY4 71 aa15.07■□□□□ 0
CCNF-201ENST00000293968 PAPSS1O43252 624 aaPredicted RBP15.07■□□□□ 0
CCNF-201ENST00000293968 CHRNGP07510 517 aa15.07■□□□□ 0
CCNF-201ENST00000293968 SCNN1BP51168 640 aa15.07■□□□□ 0
CCNF-201ENST00000293968 KYQ8NBH2 561 aa15.07■□□□□ 0
CCNF-201ENST00000293968 DNAJC28Q9NX36 388 aa15.07■□□□□ 0
CCNF-201ENST00000293968 PCDHGB4Q9UN71 923 aa15.07■□□□□ 0
CCNF-201ENST00000293968 PCDHGB5Q9Y5G0 923 aa15.07■□□□□ 0
CCNF-201ENST00000293968 COL2A1P02458 1487 aaPredicted RBP15.07■□□□□ 0
CCNF-201ENST00000293968 NRXN2Q9P2S2 1712 aa15.07■□□□□ 0
CCNF-201ENST00000293968 A0A096LPK6 155 aa15.07■□□□□ 0
CCNF-201ENST00000293968 IL18RAPO95256 599 aa15.07■□□□□ 0
CCNF-201ENST00000293968 FGFR3P22607 806 aa15.07■□□□□ 0
CCNF-201ENST00000293968 SH3BGRP55822 239 aaPredicted RBP15.07■□□□□ 0
CCNF-201ENST00000293968 SLC6A3Q01959 620 aa15.07■□□□□ 0
CCNF-201ENST00000293968 GRM1Q13255 1194 aa15.07■□□□□ 0
CCNF-201ENST00000293968 PDK1Q15118 436 aa15.07■□□□□ 0
CCNF-201ENST00000293968 HSDL1Q3SXM5 330 aa15.07■□□□□ 0
CCNF-201ENST00000293968 TMEM198Q66K66 360 aa15.07■□□□□ 0
CCNF-201ENST00000293968 SULF1Q8IWU6 871 aa15.07■□□□□ 0
CCNF-201ENST00000293968 CCDC28BQ9BUN5 200 aa15.07■□□□□ 0
CCNF-201ENST00000293968 C20orf96Q9NUD7 363 aaPredicted RBP15.07■□□□□ 0
CCNF-201ENST00000293968 PIK3R1P27986 724 aa15.07■□□□□ 0
CCNF-201ENST00000293968 RGS2P41220 211 aa15.07■□□□□ 0
CCNF-201ENST00000293968 THOP1P52888 689 aa15.07■□□□□ 0
CCNF-201ENST00000293968 NME3Q13232 169 aa15.07■□□□□ 0
CCNF-201ENST00000293968 ATG14Q6ZNE5 492 aa15.07■□□□□ 0
CCNF-201ENST00000293968 CCDC185Q8N715 623 aa15.07■□□□□ 0
CCNF-201ENST00000293968 OR52K1Q8NGK4 314 aa15.07■□□□□ 0
CCNF-201ENST00000293968 MAPK15Q8TD08 544 aa15.07■□□□□ 0
CCNF-201ENST00000293968 EME1Q96AY2 570 aa15.07■□□□□ 0
CCNF-201ENST00000293968 SPATA33Q96N06 139 aa15.07■□□□□ 0
CCNF-201ENST00000293968 BCO2Q9BYV7 579 aa15.07■□□□□ 0
CCNF-201ENST00000293968 KPNA7A9QM74 516 aa15.06■□□□□ 0
CCNF-201ENST00000293968 CSPG5O95196 566 aa15.06■□□□□ 0
CCNF-201ENST00000293968 CRTAMO95727 393 aa15.06■□□□□ 0
CCNF-201ENST00000293968 PGAM1P18669 254 aa15.06■□□□□ 0
CCNF-201ENST00000293968 XRCC1P18887 633 aaPredicted RBP15.06■□□□□ 0
CCNF-201ENST00000293968 GP5P40197 560 aa15.06■□□□□ 0
CCNF-201ENST00000293968 HNRNPDQ14103 355 aaKnown RBP15.06■□□□□ 0
CCNF-201ENST00000293968 SH2D4BQ5SQS7 431 aa15.06■□□□□ 0
CCNF-201ENST00000293968 B3GNT6Q6ZMB0 384 aa15.06■□□□□ 0
CCNF-201ENST00000293968 NDRG1Q92597 394 aaKnown RBP15.06■□□□□ 0
CCNF-201ENST00000293968 LENG1Q96BZ8 264 aaPredicted RBP15.06■□□□□ 0
CCNF-201ENST00000293968 SGF29Q96ES7 293 aa15.06■□□□□ 0
CCNF-201ENST00000293968 AGAP2Q99490 1192 aa15.06■□□□□ 0
CCNF-201ENST00000293968 ZNF670Q9BS34 389 aa15.06■□□□□ 0
CCNF-201ENST00000293968 CDH19Q9H159 772 aa15.06■□□□□ 0
CCNF-201ENST00000293968 TLK1Q9UKI8 766 aa15.06■□□□□ 0
CCNF-201ENST00000293968 PSMD13Q9UNM6 376 aa15.06■□□□□ 0
CCNF-201ENST00000293968 MYO18AQ92614 2054 aaKnown RBP15.06■□□□□ 0
CCNF-201ENST00000293968 THRAP10827 490 aa15.06■□□□□ 0
CCNF-201ENST00000293968 TPH1P17752 444 aa15.06■□□□□ 0
CCNF-201ENST00000293968 CYLC2Q14093 348 aaPredicted RBP15.06■□□□□ 0
CCNF-201ENST00000293968 SLC9A4Q6AI14 798 aa15.06■□□□□ 0
CCNF-201ENST00000293968 KLHDC10Q6PID8 442 aa15.06■□□□□ 0
CCNF-201ENST00000293968 C16orf89Q6UX73 402 aa15.06■□□□□ 0
CCNF-201ENST00000293968 ADGRG6Q86SQ4 1221 aa15.06■□□□□ 0
CCNF-201ENST00000293968 PPWD1Q96BP3 646 aaKnown RBP15.06■□□□□ 0
CCNF-201ENST00000293968 FAM167AQ96KS9 214 aa15.06■□□□□ 0
CCNF-201ENST00000293968 CSPG4P5Q96PW8 444 aa15.06■□□□□ 0
CCNF-201ENST00000293968 ILKAPQ9H0C8 392 aaPredicted RBP15.06■□□□□ 0
CCNF-201ENST00000293968 TMPRSS4Q9NRS4 437 aa15.06■□□□□ 0
CCNF-201ENST00000293968 DPP3Q9NY33 737 aa15.06■□□□□ 0
CCNF-201ENST00000293968 MOCS1Q9NZB8 636 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms