RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 HARS2P49590 506 aaKnown RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 SLC26A2P50443 739 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 DEUP1Q05D60 604 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 DLG1Q12959 904 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 MED21Q13503 144 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 TNS4Q8IZW8 715 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 ARHGAP18Q8N392 663 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 AFG1LQ8WV93 481 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 CENPIQ92674 756 aaPredicted RBP13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 CENPKQ9BS16 269 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 CCDC28BQ9BUN5 200 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 VCX3BQ9H321 246 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 DPEP3Q9H4B8 488 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 GGA3Q9NZ52 723 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 USP3Q9Y6I4 520 aa13.59□□□□□ -0.23
SLC28A1-201ENST00000286749 E9PBE3 544 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 ZBTB14O43829 449 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 KLHL41O60662 606 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 MX2P20592 715 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 ADORA2BP29275 332 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 INSCQ1MX18 579 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 FBXW8Q8N3Y1 598 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 TRPM4Q8TD43 1214 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 PGBD4Q96DM1 585 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 SNX15Q9NRS6 342 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 ETAA1Q9NY74 926 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 HACD1B0YJ81 288 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 RTN3O95197 1032 aaPredicted RBP13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 TXNP10599 105 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 COX4I1P13073 169 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 CCDC130P13994 396 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 ARL4AP40617 200 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 SNX16P57768 344 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 NAB1Q13506 487 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 OLIG2Q13516 323 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 DALRD3Q5D0E6 543 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 GADL1Q6ZQY3 521 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 SLC26A9Q7LBE3 791 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 FAM131BQ86XD5 332 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 ZDHHC17Q8IUH5 632 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 PLD6Q8N2A8 252 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 ZNF781Q8N8C0 355 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 OR6B3Q8NGW1 331 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 P2RY11Q96G91 374 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 ZCWPW1Q9H0M4 648 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 COG4Q9H9E3 785 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 EIF2B3Q9NR50 452 aaKnown RBP13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 PDGFCQ9NRA1 345 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 RPS6KL1Q9Y6S9 549 aa13.58□□□□□ -0.24
SLC28A1-201ENST00000286749 TXNDC9O14530 226 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 STK10O94804 968 aaKnown RBP13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 HSPA4LO95757 839 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 VCLP18206 1134 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 GP5P40197 560 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 GTF2A2P52657 109 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 VGLL4Q14135 290 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 MMEL1Q495T6 779 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 SLC9B1Q4ZJI4 515 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 NAPRTQ6XQN6 538 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 DCLK2Q8N568 766 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 AGR3Q8TD06 166 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 CERS2Q96G23 380 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 MPHOSPH6Q99547 160 aaKnown RBP13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 FAM124BQ9H5Z6 455 aaPredicted RBP13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 TMPRSS4Q9NRS4 437 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 ERAP1Q9NZ08 941 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 H3BNX3 289 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 POLBP06746 335 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 ETS2P15036 469 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 GARSP41250 739 aaKnown RBP13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 GRIA2P42262 883 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 ABCG1P45844 678 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 HACE1Q8IYU2 909 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 CCNYQ8ND76 341 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 MAPK15Q8TD08 544 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 NLRP7Q8WX94 980 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 GTF2IRD1Q9UHL9 959 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 PACSIN3Q9UKS6 424 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 ARHGAP26Q9UNA1 814 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 PCDHB12Q9Y5F1 795 aa13.57□□□□□ -0.24
SLC28A1-201ENST00000286749 A0A1B0GVG6 124 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 TSPAN1O60635 241 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 CD1EP15812 388 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 KLF10Q13118 480 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 KYAT1Q16773 422 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 GRAMD1BQ3KR37 738 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 FSCBQ5H9T9 825 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 GJC2Q5T442 439 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 EPGNQ6UW88 154 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 FCRL3Q96P31 734 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 NAT9Q9BTE0 207 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 CDH19Q9H159 772 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 DMAP1Q9NPF5 467 aaPredicted RBP13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 TBC1D30Q9Y2I9 924 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 CDY2AQ9Y6F7 541 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 CDY1Q9Y6F8 540 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 ANKRD33BA6NCL7 494 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 PDGFRBP09619 1106 aa13.56□□□□□ -0.24
SLC28A1-201ENST00000286749 MTTPP55157 894 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms