RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MFHAS1Q9Y4C4 1052 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 NUMBLQ9Y6R0 609 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 F5H5T6 163 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 CHKAP35790 457 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 ARL4AP40617 200 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 HTR4Q13639 388 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 PPP2R5EQ16537 467 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 ACBD5Q5T8D3 534 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 TPGS1Q6ZTW0 290 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 CIR1Q86X95 450 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 OSCP1Q8WVF1 389 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 RPRD1AQ96P16 312 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 FAM83CQ9BQN1 747 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 TBC1D14Q9P2M4 693 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 PPARGC1AQ9UBK2 798 aaKnown RBP22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 ZNF212Q9UDV6 495 aa22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 KIF26AQ9ULI4 1882 aaPredicted RBP22.49■■□□□ 1.19
PDLIM3-203ENST00000284771 MYO10Q9HD67 2058 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 ZNF487B1APH4 448 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 ERCC2P18074 760 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 PTPN7P35236 360 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 GRM2Q14416 872 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 RWDD4Q6NW29 188 aaKnown RBP22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 LRRC31Q6UY01 552 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 NLRP14Q86W24 1093 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 TMEM25Q86YD3 366 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 KIAA1958Q8N8K9 716 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 TDRD5Q8NAT2 981 aaKnown RBP22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 TBC1D31Q96DN5 1066 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 NUP205Q92621 2012 aa22.48■■□□□ 1.19
PDLIM3-203ENST00000284771 OTOL1A6NHN0 477 aaPredicted RBP22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 H3BRJ5 948 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 CES2O00748 559 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 DCLK1O15075 740 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 ECI2O75521 394 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 PSMC3P17980 439 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 KLF1Q13351 362 aaPredicted RBP22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 EML3Q32P44 896 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 RHBDF2Q6PJF5 856 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 PLD5Q8N7P1 536 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 BHMTQ93088 406 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 E2F7Q96AV8 911 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 TMA16Q96EY4 203 aaKnown RBP22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 ZYG11BQ9C0D3 744 aa22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 DUS2Q9NX74 493 aaKnown RBP22.47■■□□□ 1.19
PDLIM3-203ENST00000284771 PDE2AO00408 941 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 CST8O60676 142 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 URI1O94763 535 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 FGGP02679 453 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 ZNF135P52742 658 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 SEL1L2Q5TEA6 688 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 SLC9A4Q6AI14 798 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 SLC13A5Q86YT5 568 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 OTUB2Q96DC9 234 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 CAPZA3Q96KX2 299 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 DDX50Q9BQ39 737 aaKnown RBP22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 PLK2Q9NYY3 685 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 SAE1Q9UBE0 346 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 LIMD1Q9UGP4 676 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 TTC7AQ9ULT0 858 aaPredicted RBP22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 EFR3BQ9Y2G0 817 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 NR2E1Q9Y466 385 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 VCANP13611 3396 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 DAPK3O43293 454 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 ARSAP15289 507 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 DYNLT1P63172 113 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 TNK2Q07912 1038 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 LY6G5CQ5SRR4 150 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 FYB2Q5VWT5 728 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 NCBP2-AS2Q69YL0 99 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 MTSS1LQ765P7 747 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 ADAT2Q7Z6V5 191 aaKnown RBP22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 NETO2Q8NC67 525 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 ACTRT1Q8TDG2 376 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 IRF7Q92985 503 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 KLC2Q9H0B6 622 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 EBF3Q9H4W6 596 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 SPHK2Q9NRA0 654 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 CLEC4EQ9ULY5 219 aa22.46■■□□□ 1.19
PDLIM3-203ENST00000284771 SLC9A3R1O14745 358 aaPredicted RBP22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 HTR7P34969 479 aa22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 TFAP2DQ7Z6R9 452 aa22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 RFX6Q8HWS3 928 aa22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 TP53INP2Q8IXH6 220 aa22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 NPWQ8N729 165 aa22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 MAK16Q9BXY0 300 aaKnown RBP22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 KCNK12Q9HB15 430 aa22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 HPS4Q9NQG7 708 aa22.45■■□□□ 1.18
PDLIM3-203ENST00000284771 TBL1XO60907 577 aa22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 RHOQP17081 205 aa22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 HOXD9P28356 352 aaPredicted RBP22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 SLC10A2Q12908 348 aaPredicted RBP22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 SIX1Q15475 284 aaPredicted RBP22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 PUS10Q3MIT2 529 aaKnown RBP22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 DNTTIP2Q5QJE6 756 aaKnown RBP22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 BBS12Q6ZW61 710 aa22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 RTL3Q8N8U3 475 aaKnown RBP22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 OR52K2Q8NGK3 314 aa22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 DDI1Q8WTU0 396 aa22.44■■□□□ 1.18
PDLIM3-203ENST00000284771 RRAGDQ9NQL2 400 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms