RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ZSCAN18Q8TBC5 510 aaPredicted RBP10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 P2RY11Q96G91 374 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 MSLNLQ96KJ4 702 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 GUCD1Q96NT3 240 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 EPAS1Q99814 870 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 HINFPQ9BQA5 517 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 DDX47Q9H0S4 455 aaKnown RBP10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 TDP1Q9NUW8 608 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 NDFIP2Q9NV92 336 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 RNF14Q9UBS8 474 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 ARHGAP26Q9UNA1 814 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 SH3BP1Q9Y3L3 701 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 HEY1Q9Y5J3 304 aa10.05□□□□□ -0.8
SNRNP40-201ENST00000263694 CTAGE15A4D2H0 777 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 APOL1O14791 398 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 DCLK1O15075 740 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 TJP3O95049 919 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 SLU7O95391 586 aaKnown RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 CTAGE8P0CG41 777 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 SLC11A2P49281 568 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 RPS24P62847 133 aaKnown RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 OTUD4Q01804 1114 aaKnown RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 CKAP4Q07065 602 aaKnown RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 NAA30Q147X3 362 aaPredicted RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 HABP4Q5JVS0 413 aaKnown RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 NCBP2-AS2Q69YL0 99 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 SLC9A4Q6AI14 798 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 CES5AQ6NT32 575 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 TTC27Q6P3X3 843 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 ZNF572Q7Z3I7 529 aaPredicted RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 TFAP2DQ7Z6R9 452 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 CTAGE6Q86UF2 777 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 CTAGE4Q8IX94 777 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 DEFB123Q8N688 67 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 CEP112Q8N8E3 955 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 MNS1Q8NEH6 495 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 ACTL9Q8TC94 416 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 BHMTQ93088 406 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 TBC1D31Q96DN5 1066 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 PABPC5Q96DU9 382 aaKnown RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 CELF6Q96J87 481 aaKnown RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 C1orf74Q96LT6 269 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 RPRD1AQ96P16 312 aaPredicted RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 MYADMQ96S97 322 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 KRT12Q99456 494 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 DCLK3Q9C098 648 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 EPC1Q9H2F5 836 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 LINC00597Q9H2U6 94 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 POMKQ9H5K3 350 aa10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
SNRNP40-201ENST00000263694 SHROOM3Q8TF72 1996 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 EYSQ5T1H1 3165 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 MFSD11O43934 449 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 PFKLP17858 780 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 HCAR3P49019 387 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 ITIH3Q06033 890 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 TFDP2Q14188 446 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 COL19A1Q14993 1142 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 SKIV2LQ15477 1246 aaKnown RBP10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 ADGRF1Q5T601 910 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 LRRC31Q6UY01 552 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 HTR3DQ70Z44 454 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 PRUNE1Q86TP1 453 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 ZC3H18Q86VM9 953 aaKnown RBP10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 NPWQ8N729 165 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 MAGOHBQ96A72 148 aaKnown RBP10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 PRICKLE1Q96MT3 831 aaPredicted RBP10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 NAP1L3Q99457 506 aaPredicted RBP10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 STIM2Q9P246 746 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 RCOR3Q9P2K3 495 aaPredicted RBP10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 DNPEPQ9ULA0 475 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 EFR3BQ9Y2G0 817 aa10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 ZFP37Q9Y6Q3 630 aaPredicted RBP10.03□□□□□ -0.8
SNRNP40-201ENST00000263694 IGLV3-10A0A075B6K4 115 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 GRXCR2A6NFK2 248 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 DRGXA6NNA5 263 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF487B1APH4 448 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 F5H5T6 163 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 APOC4-APOC2K7ER74 178 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 APOC2P02655 101 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 FOSL2P15408 326 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 KCNA5P22460 613 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 HOXC13P31276 330 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 GBP2P32456 591 aaPredicted RBP10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 NRLP54845 237 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 NRG1Q02297 640 aaPredicted RBP10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 ZNF77Q15935 545 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 TEX35Q5T0J7 233 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 TANGO2Q6ICL3 276 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 TPGS1Q6ZTW0 290 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 NLRP14Q86W24 1093 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 VSIG1Q86XK7 387 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 SMRP1Q8NCR6 262 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 P3H4Q92791 437 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 AZIN2Q96A70 460 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 ASB16Q96NS5 453 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 LRRC1Q9BTT6 524 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 ZYG11BQ9C0D3 744 aa10.02□□□□□ -0.81
SNRNP40-201ENST00000263694 KLC2Q9H0B6 622 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms