RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 A0A096LPK6 155 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 A0A0A0MRY4 1105 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 PLIN3O60664 434 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 GLRA3O75311 464 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 PRKCHP24723 683 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 ATICP31939 592 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 SERPINB9P50453 376 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 SEPT6Q14141 434 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 R3HDM1Q15032 1099 aaKnown RBP13.85□□□□□ -0.19
VHL-201ENST00000256474 MMEL1Q495T6 779 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 AP1ARQ63HQ0 302 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 TMEM198Q66K66 360 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 ACVR1CQ8NER5 493 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 SPATA13Q96N96 652 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 TSNARE1Q96NA8 513 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 CATSPER2Q96P56 530 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 ZNF670Q9BS34 389 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 SIRPGQ9P1W8 387 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 FETUBQ9UGM5 382 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 ITGA11Q9UKX5 1188 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 SOCS7O14512 581 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 GAS2O43903 313 aaKnown RBP13.85□□□□□ -0.19
VHL-201ENST00000256474 HUS1O60921 280 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 GRIK4Q16099 956 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 TAZQ16635 292 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 TRMT5Q32P41 509 aaKnown RBP13.85□□□□□ -0.19
VHL-201ENST00000256474 LAYNQ6UX15 382 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 FRMD7Q6ZUT3 714 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 KHSRPQ92945 711 aaKnown RBP eCLIP13.85□□□□□ -0.19
VHL-201ENST00000256474 TLE6Q9H808 572 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 CHRAC1Q9NRG0 131 aa13.85□□□□□ -0.19
VHL-201ENST00000256474 MYOCOSA0A1B0GUC4 107 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 MAGEA13PA6NCF6 341 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 BEST1O76090 585 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 SERPINA6P08185 405 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 NCAM1P13591 858 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 MX2P20592 715 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 GARSP41250 739 aaKnown RBP13.84□□□□□ -0.19
VHL-201ENST00000256474 CDC16Q13042 620 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 SLC9B1Q4ZJI4 515 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 ZNF567Q8N184 647 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 GDPD5Q8WTR4 605 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 SLC35F5Q8WV83 523 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 APBA2Q99767 749 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 ECSITQ9BQ95 431 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 COG4Q9H9E3 785 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 CYP4F12Q9HCS2 524 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 BFARQ9NZS9 450 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 ZNF212Q9UDV6 495 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 FAM159BA6NKW6 160 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 FAM72CH0Y354 149 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 TK2O00142 265 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 DFFAO00273 331 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 JCHAINP01591 159 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 LTFP02788 710 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 LYNP07948 512 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 FGF3P11487 239 aaPredicted RBP13.84□□□□□ -0.19
VHL-201ENST00000256474 MPSTP25325 297 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 GABRB2P47870 512 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 IDH3AP50213 366 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 AQP4P55087 323 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 MRPS22P82650 360 aaKnown RBP13.84□□□□□ -0.19
VHL-201ENST00000256474 TEX44Q53QW1 395 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 FAM72AQ5TYM5 149 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 SLC9A4Q6AI14 798 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 FAM72DQ6L9T8 149 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 ATG14Q6ZNE5 492 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 FAM72BQ86X60 149 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 EXT2Q93063 718 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 hCG_2014768A0A024R1R8 64 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 IGKV6-21A0A0C4DH24 114 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 SERPINE1P05121 402 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 IREB2P48200 963 aaKnown RBP13.84□□□□□ -0.19
VHL-201ENST00000256474 PLK1P53350 603 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 NAGLUP54802 743 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 IRX1P78414 480 aaPredicted RBP13.84□□□□□ -0.19
VHL-201ENST00000256474 PCLAFQ15004 111 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 FBXO47Q5MNV8 452 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 EXOC8Q8IYI6 725 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 APPL2Q8NEU8 664 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 ZSCAN18Q8TBC5 510 aaPredicted RBP13.84□□□□□ -0.19
VHL-201ENST00000256474 HASPINQ8TF76 798 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 NMD3Q96D46 503 aaKnown RBP13.84□□□□□ -0.19
VHL-201ENST00000256474 ZFP42Q96MM3 310 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 OR52B2Q96RD2 323 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 CCDC106Q9BWC9 280 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 DDIT4Q9NX09 232 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 TLK1Q9UKI8 766 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 EMCNQ9ULC0 261 aa13.84□□□□□ -0.19
VHL-201ENST00000256474 TRIP11Q15643 1979 aa13.83□□□□□ -0.2
VHL-201ENST00000256474 CAPN8A6NHC0 703 aa13.83□□□□□ -0.2
VHL-201ENST00000256474 STX16-NPEPL1H3BU86 382 aa13.83□□□□□ -0.2
VHL-201ENST00000256474 PPP1R12AO14974 1030 aaPredicted RBP13.83□□□□□ -0.2
VHL-201ENST00000256474 SPTLC1O15269 473 aa13.83□□□□□ -0.2
VHL-201ENST00000256474 NELFEP18615 380 aaKnown RBP13.83□□□□□ -0.2
VHL-201ENST00000256474 EDNRBP24530 442 aa13.83□□□□□ -0.2
VHL-201ENST00000256474 TKTP29401 623 aaKnown RBP13.83□□□□□ -0.2
VHL-201ENST00000256474 ARRB2P32121 409 aa13.83□□□□□ -0.2
VHL-201ENST00000256474 TPI1P60174 286 aa13.83□□□□□ -0.2
VHL-201ENST00000256474 CACNB2Q08289 660 aaPredicted RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms