RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 ARHGEF18Q6ZSZ5 1173 aa19.27■□□□□ 0.67
TNFSF9-201ENST00000245817 HOOK3Q86VS8 718 aa19.27■□□□□ 0.67
TNFSF9-201ENST00000245817 ZCCHC9Q8N567 271 aaKnown RBP19.27■□□□□ 0.67
TNFSF9-201ENST00000245817 TAB3Q8N5C8 712 aaPredicted RBP19.27■□□□□ 0.67
TNFSF9-201ENST00000245817 SAMD11Q96NU1 681 aa19.27■□□□□ 0.67
TNFSF9-201ENST00000245817 SEPT10Q9P0V9 454 aa19.27■□□□□ 0.67
TNFSF9-201ENST00000245817 VANGL2Q9ULK5 521 aa19.27■□□□□ 0.67
TNFSF9-201ENST00000245817 LAMA3Q16787 3333 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 HIDE1A8MVS5 230 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 TP73O15350 636 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 MTSS1O43312 755 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 MYOGP15173 224 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 SLC11A2P49281 568 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 AUHQ13825 339 aaKnown RBP19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 PRKD1Q15139 912 aaPredicted RBP19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 CCDC110Q8TBZ0 833 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 PLD4Q96BZ4 506 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 TXLNGYQ9BZA5 131 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 ZYG11BQ9C0D3 744 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 PABPC3Q9H361 631 aaKnown RBP19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 RAB6BQ9NRW1 208 aa19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 PPARGC1AQ9UBK2 798 aaKnown RBP19.26■□□□□ 0.67
TNFSF9-201ENST00000245817 OPA1O60313 960 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 CHKAP35790 457 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 NRLP54845 237 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 PPM1LQ5SGD2 360 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 PRPF38BQ5VTL8 546 aaKnown RBP19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 RAP1GAP2Q684P5 730 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 DENND2CQ68D51 928 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 TRMT10CQ7L0Y3 403 aaKnown RBP19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 C14orf80Q86SX3 495 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 CHSY1Q86X52 802 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 NPWQ8N729 165 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 NETO2Q8NC67 525 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 CPT1BQ92523 772 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 P2RY11Q96G91 374 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 ZIM3Q96PE6 472 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 GCNAQ96QF7 691 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 TGS1Q96RS0 853 aaKnown RBP19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 TRPC7Q9HCX4 862 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 PLAAQ9Y263 795 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 CLUHO75153 1309 aa19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 ZNF638Q14966 1978 aaKnown RBP19.25■□□□□ 0.67
TNFSF9-201ENST00000245817 GREB1Q4ZG55 1949 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 SPDYE4A6NLX3 237 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 GRXCR1A8MXD5 290 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 DFFAO00273 331 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 CA3P07451 260 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 DNAJB1P25685 340 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 GARSP41250 739 aaKnown RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 KCNQ1P51787 676 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 GALNT2Q10471 571 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 LRIG3Q6UXM1 1119 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 PPP1R21Q6ZMI0 780 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 CENPUQ71F23 418 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 RTL10Q7L3V2 364 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 IQCKQ8N0W5 287 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 RTL3Q8N8U3 475 aaKnown RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 MRPS31Q92665 395 aaKnown RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 PRCCQ92733 491 aaPredicted RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 HDAC11Q96DB2 347 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 CELF6Q96J87 481 aaKnown RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 RBM15Q96T37 977 aaKnown RBP eCLIP19.24■□□□□ 0.679e-8■■■■□ 25.9
TNFSF9-201ENST00000245817 MED4Q9NPJ6 270 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 DNAJC17Q9NVM6 304 aaKnown RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 FAM53CQ9NYF3 392 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 MPP6Q9NZW5 540 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 FARP1Q9Y4F1 1045 aaPredicted RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 A0A0A0MRY4 1105 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 C2orf78A6NCI8 922 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 E7EVH7 732 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 F5H5T6 163 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 CHADO15335 359 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 OPHN1O60890 802 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 OAS1P00973 400 aaKnown RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 F11P03951 625 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 MBL2P11226 248 aaPredicted RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 VAV1P15498 845 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 RHOQP17081 205 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 ARL4CP56559 192 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 PPIDQ08752 370 aaKnown RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 IFFO1Q0D2I5 559 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 UAP1Q16222 522 aaPredicted RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 ANKRD20A2Q5SQ80 823 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 ANKRD20A1Q5TYW2 823 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 ANKRD20A3Q5VUR7 823 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 PDE12Q6L8Q7 609 aaKnown RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 NAT8LQ8N9F0 302 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 ZBTB9Q96C00 473 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 SPATA13Q96N96 652 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 RPRD1AQ96P16 312 aaPredicted RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 SEMA4AQ9H3S1 761 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 ZNF334Q9HCZ1 680 aaPredicted RBP19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 NEU3Q9UQ49 428 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 PCDHA11Q9Y5I1 949 aa19.24■□□□□ 0.67
TNFSF9-201ENST00000245817 A0A1W2PPC1 479 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 GOLGA6L10A6NI86 522 aa19.23■□□□□ 0.67
TNFSF9-201ENST00000245817 WASH4PA8MWX3 477 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms