RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 IDH3AP50213 366 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 INAQ16352 499 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 TFB1MQ8WVM0 346 aaKnown RBP14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 RXFP2Q8WXD0 754 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 EME1Q96AY2 570 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 CDRT15Q96T59 188 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 FERMT1Q9BQL6 677 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 RSAD1Q9HA92 442 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 RNF146Q9NTX7 359 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 FZD1Q9UP38 647 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 SPDYE2BA6NHP3 402 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 STX16-NPEPL1H3BU86 382 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 HSPA4LO95757 839 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 SPDYE6P0CI01 402 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 FGFR3P22607 806 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 WASHC5Q12768 1159 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 TRIM16LQ309B1 348 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 SPDYE2Q495Y8 402 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 TEDDM1Q5T9Z0 273 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 WDR78Q5VTH9 848 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 NLRP7Q8WX94 980 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 PAK5Q9P286 719 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 ZNF70Q9UC06 446 aaPredicted RBP14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 USP21Q9UK80 565 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 PSAT1Q9Y617 370 aa14.51□□□□□ -0.09
PCDHB3-201ENST00000231130 SYNJ2BP-COX16A0A087WUM0 186 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 TCRBV5S1A1TA0A578 114 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 KLF11O14901 512 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 RCVRNP35243 200 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 SNAPC2Q13487 334 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 LRRC71Q8N4P6 559 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 MARVELD2Q8N4S9 558 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 ATG4CQ96DT6 458 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 TWNKQ96RR1 684 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 RBM38Q9H0Z9 239 aaKnown RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 DHX35Q9H5Z1 703 aaKnown RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 COX16Q9P0S2 106 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 TMX2-CTNND1H3BSU7 103 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 GJB1P08034 283 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 HMOX2P30519 316 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 PTGER2P43116 358 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 YWHAEP62258 255 aaKnown RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 XIAPP98170 497 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 CA9Q16790 459 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 DUOXA2Q1HG44 320 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 SLFN12LQ6IEE8 588 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 MAVSQ7Z434 540 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 RTKN2Q8IZC4 609 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 GABPB2Q8TAK5 448 aaPredicted RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 JADE3Q92613 823 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 CMTM5Q96DZ9 223 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 LENG8Q96PV6 779 aaPredicted RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 SACM1LQ9NTJ5 587 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 TMEM216Q9P0N5 145 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 EBF1Q9UH73 591 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 COL16A1Q07092 1604 aaPredicted RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 A8MU76 341 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 CSPG5O95196 566 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 TGFB2P61812 414 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 OLIG2Q13516 323 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 FLOT2Q14254 428 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 NOMO1Q15155 1222 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 ZNF423Q2M1K9 1284 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 SMUG1Q53HV7 270 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 KYAT3Q6YP21 454 aaKnown RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 GPR141Q7Z602 305 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 SREK1Q8WXA9 508 aaKnown RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 HPS1Q92902 700 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 TMA16Q96EY4 203 aaKnown RBP14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 PLEKHA8Q96JA3 519 aa14.5□□□□□ -0.09
PCDHB3-201ENST00000231130 C1orf232A0A0U1RR37 186 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 PEX10O60683 326 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 AOC1P19801 751 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 RPL10P27635 214 aaKnown RBP14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ARRB2P32121 409 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 CCR10P46092 362 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ARPC4P59998 168 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 TAP1Q03518 808 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 CCDC153Q494R4 210 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 XYLT1Q86Y38 959 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 C17orf75Q9HAS0 396 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 PLAC1Q9HBJ0 212 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ARHGEF37A1IGU5 675 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 PSMD12O00232 456 aaPredicted RBP14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ZBTB14O43829 449 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ERVK-10P10266 1014 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 RALBP11234 206 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 COX4I1P13073 169 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 CCDC130P13994 396 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 S100A1P23297 94 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 PHKA2P46019 1235 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ATXN1P54253 815 aaKnown RBP14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 CYP2A13Q16696 494 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 SLC9B1Q4ZJI4 515 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 SNX32Q86XE0 403 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 AHI1Q8N157 1196 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 FBXW8Q8N3Y1 598 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 PLD5Q8N7P1 536 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 ZNF781Q8N8C0 355 aa14.49□□□□□ -0.09
PCDHB3-201ENST00000231130 AGAP3Q96P47 875 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms