RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 TYMPP19971 482 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 ASPAP45381 313 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 MARC1Q5VT66 337 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 RETSATQ6NUM9 610 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 WDR93Q6P2C0 686 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 THAP11Q96EK4 314 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 HNRNPABQ99729 332 aaKnown RBP9.65□□□□□ -0.86
CCDC113-201ENST00000219299 GPR63Q9BZJ6 419 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 TSR3Q9UJK0 312 aaKnown RBP9.65□□□□□ -0.86
CCDC113-201ENST00000219299 COL11A2P13942 1736 aaPredicted RBP9.65□□□□□ -0.86
CCDC113-201ENST00000219299 PITPNM1O00562 1244 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 COL6A1P12109 1028 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 ACADSP16219 412 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 MARCKSL1P49006 195 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 OCRLQ01968 901 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 ARHGEF7Q14155 803 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 KYNUQ16719 465 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 AADACL2Q6P093 401 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 SCG3Q8WXD2 468 aaKnown RBP9.65□□□□□ -0.86
CCDC113-201ENST00000219299 GMIPQ9P107 970 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 DNAJB4Q9UDY4 337 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 MAST2Q6P0Q8 1798 aa9.65□□□□□ -0.86
CCDC113-201ENST00000219299 CCL16O15467 120 aa9.65□□□□□ -0.87
CCDC113-201ENST00000219299 MSI1O43347 362 aaKnown RBP9.65□□□□□ -0.87
CCDC113-201ENST00000219299 ZNF623O75123 536 aa9.65□□□□□ -0.87
CCDC113-201ENST00000219299 SEC24CP53992 1094 aa9.65□□□□□ -0.87
CCDC113-201ENST00000219299 RHOAP61586 193 aa9.65□□□□□ -0.87
CCDC113-201ENST00000219299 TAF5Q15542 800 aa9.65□□□□□ -0.87
CCDC113-201ENST00000219299 TTYH3Q9C0H2 523 aa9.65□□□□□ -0.87
CCDC113-201ENST00000219299 NRDE2Q9H7Z3 1164 aa9.65□□□□□ -0.87
CCDC113-201ENST00000219299 DMGDHQ9UI17 866 aaKnown RBP9.65□□□□□ -0.87
CCDC113-201ENST00000219299 FIS1Q9Y3D6 152 aa9.65□□□□□ -0.87
CCDC113-201ENST00000219299 SYCE1LA8MT33 242 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 HCRTO43612 131 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 C8AP07357 584 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 TAC1P20366 129 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 TMEM259Q4ZIN3 620 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 TAF1BQ53T94 588 aaPredicted RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 MARCH8Q5T0T0 291 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 NAPEPLDQ6IQ20 393 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 TMCO2Q7Z6W1 182 aaPredicted RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ACTRT1Q8TDG2 376 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 DIS3LQ8TF46 1054 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 TEKT4Q8WW24 435 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ALKBH8Q96BT7 664 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 DCLK3Q9C098 648 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ALG13Q9NP73 1137 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 DLGAP2Q9P1A6 1054 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 REXO2Q9Y3B8 237 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 SLC30A1Q9Y6M5 507 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 LAMB2P55268 1798 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 A0A1W2PQH9 124 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 FAM155AB1AL88 458 aaPredicted RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ZNF263O14978 683 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ANXA9O76027 345 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ASMTLO95671 621 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 CHEK2O96017 543 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 KDELR1P24390 212 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 KRT33BQ14525 404 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 CCNG2Q16589 344 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 BLOC1S5Q8TDH9 187 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 PPP1R2P1Q96PQ5 205 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 FAM47DPA6NHR8 397 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 E5RI56 91 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 WARSP23381 471 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 SERPINB3P29508 390 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 JAM2P57087 298 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ENPEPQ07075 957 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 CACUL1Q86Y37 369 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 MFN1Q8IWA4 741 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 KREMEN2Q8NCW0 462 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 PPHLN1Q8NEY8 458 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 SUSD3Q96L08 255 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 C10orf88Q9H8K7 445 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 PLK2Q9NYY3 685 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 GGT7Q9UJ14 662 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 PHF24Q9UPV7 400 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 RWDD3Q9Y3V2 267 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 SQORQ9Y6N5 450 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 TMEM191CA6NGB0 347 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 VHLP40337 213 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 TMED10P49755 219 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 AMPD2Q01433 879 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 GPM6BQ13491 265 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 TIGD7Q6NT04 549 aaPredicted RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 RNF135Q8IUD6 432 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 SMG8Q8ND04 991 aaKnown RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 SCAMP5Q8TAC9 235 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ZNF669Q96BR6 464 aaPredicted RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 HIC2Q96JB3 615 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ROPN1BQ9BZX4 212 aaPredicted RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 ROPN1Q9HAT0 212 aaPredicted RBP9.64□□□□□ -0.87
CCDC113-201ENST00000219299 SSC5DA1L4H1 1573 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 MYH11P35749 1972 aa9.64□□□□□ -0.87
CCDC113-201ENST00000219299 SPTLC1O15269 473 aa9.63□□□□□ -0.87
CCDC113-201ENST00000219299 PSMD3O43242 534 aa9.63□□□□□ -0.87
CCDC113-201ENST00000219299 CDH16O75309 829 aa9.63□□□□□ -0.87
CCDC113-201ENST00000219299 STBD1O95210 358 aa9.63□□□□□ -0.87
CCDC113-201ENST00000219299 ESRRBO95718 433 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms