RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 PLAC1Q9HBJ0 212 aa8.49□□□□□ -1.05
VAMP3-201ENST00000054666 SMYD2Q9NRG4 433 aa8.49□□□□□ -1.05
VAMP3-201ENST00000054666 TRMT13Q9NUP7 481 aaKnown RBP8.49□□□□□ -1.05
VAMP3-201ENST00000054666 PCMTD2Q9NV79 361 aa8.49□□□□□ -1.05
VAMP3-201ENST00000054666 OR12D3Q9UGF7 316 aa8.49□□□□□ -1.05
VAMP3-201ENST00000054666 TRHDEQ9UKU6 1024 aa8.49□□□□□ -1.05
VAMP3-201ENST00000054666 ZNF638Q14966 1978 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ERI2A8K979 691 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 POLBP06746 335 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ELNP15502 786 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 PTPN3P26045 913 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ETV4P43268 484 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 MGAT5Q09328 741 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 GALNT2Q10471 571 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 CRYMQ14894 314 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 FAM26DQ5JW98 314 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 SPANXN3Q5MJ09 141 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 MROH9Q5TGP6 573 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 BTBD8Q5XKL5 378 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ATG16L1Q676U5 607 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 PM20D1Q6GTS8 502 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 BEND5Q7L4P6 421 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 BHLHA9Q7RTU4 235 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 TBC1D1Q86TI0 1168 aaPredicted RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 PARP9Q8IXQ6 854 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 OR10T2Q8NGX3 314 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 DQX1Q8TE96 717 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ATP2A3Q93084 1043 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 TRIM56Q9BRZ2 755 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 MYLK2Q9H1R3 596 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 GBA3Q9H227 469 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ALG13Q9NP73 1137 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 SYBUQ9NX95 663 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 MOCS1Q9NZB8 636 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ZFATQ9P243 1243 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 PCDHB8Q9UN66 801 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 THSD7BQ9C0I4 1608 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 C2CD2LO14523 706 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 UGT1A9O60656 530 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ALDH1A2O94788 518 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 LRIG2O94898 1065 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 UNC5CO95185 931 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 AP2A1O95782 977 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 NQO1P15559 274 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 BGNP21810 368 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 GRIK1P39086 918 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 GARSP41250 739 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 SLC5A3P53794 718 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 CRADDP78560 199 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 PRPSAP1Q14558 356 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 BRMS1LQ5PSV4 323 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 RWDD4Q6NW29 188 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 SH2D5Q6ZV89 423 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 NLRP9Q7RTR0 991 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 SUGP1Q8IWZ8 645 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 NDUFAF2Q8N183 169 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 NPWQ8N729 165 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 DNAAF3Q8N9W5 541 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 PATJQ8NI35 1801 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 GLT1D1Q96MS3 346 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 AGAP3Q96P47 875 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 RAB3IPQ96QF0 476 aaPredicted RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 SLC13A1Q9BZW2 595 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 C12orf65Q9H3J6 166 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 LRRC40Q9H9A6 602 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 UGT1A7Q9HAW7 530 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 UGT1A10Q9HAW8 530 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 UGT1A8Q9HAW9 530 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 ABCC13Q9NSE7 274 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 PIH1D1Q9NWS0 290 aaKnown RBP8.48□□□□□ -1.05
VAMP3-201ENST00000054666 BFARQ9NZS9 450 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 VANGL2Q9ULK5 521 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 PLLPQ9Y342 182 aa8.48□□□□□ -1.05
VAMP3-201ENST00000054666 AP3B1O00203 1094 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 KLF11O14901 512 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 IRAK2O43187 625 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 RFPL1O75677 317 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 CCNB1P14635 433 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 HTR7P34969 479 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 RASSF2P50749 326 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 MNAT1P51948 309 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 SP3Q02447 781 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 NIPAL4Q0D2K0 466 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 CCSAPQ6IQ19 270 aaPredicted RBP8.47□□□□□ -1.05
VAMP3-201ENST00000054666 ZNF449Q6P9G9 518 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 TIFABQ6ZNK6 161 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 ZNF598Q86UK7 904 aaKnown RBP8.47□□□□□ -1.05
VAMP3-201ENST00000054666 ATPAF2Q8N5M1 289 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 ARMC2Q8NEN0 867 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 ACMSDQ8TDX5 336 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 HHIPL1Q96JK4 782 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 FAM193BQ96PV7 902 aaPredicted RBP8.47□□□□□ -1.05
VAMP3-201ENST00000054666 ZIC5Q96T25 663 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 PKMYT1Q99640 499 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 CATSPERBQ9H7T0 1116 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 ANLNQ9NQW6 1124 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 TMLHEQ9NVH6 421 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 ZFP69BQ9UJL9 534 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 DCTN4Q9UJW0 460 aa8.47□□□□□ -1.05
VAMP3-201ENST00000054666 CHKBQ9Y259 395 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms