RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 CACNA2D2Q9NY47 1150 aa11.34□□□□□ -0.59
RGPD5-201ENST00000016946 MGAT4DA6NG13 374 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 RBL1P28749 1068 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 MAMLD1Q13495 774 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 C9orf57Q5W0N0 161 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 RFX8Q6ZV50 586 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 DNAJC18Q9H819 358 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 ZNF556Q9HAH1 456 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 RWDD3Q9Y3V2 267 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 CNTNAP1P78357 1384 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 UBR1Q8IWV7 1749 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 TBL1XO60907 577 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 FGF19O95750 216 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 SOX11P35716 441 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 MRPS5P82675 430 aaKnown RBP11.33□□□□□ -0.6
RGPD5-201ENST00000016946 IRAK1BP1Q5VVH5 260 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 SPATA20Q8TB22 786 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 DUSP16Q9BY84 665 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 RMND5AQ9H871 391 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 IL1RL2Q9HB29 575 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 STK39Q9UEW8 545 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 ZSCAN5CA6NGD5 496 aaPredicted RBP11.33□□□□□ -0.6
RGPD5-201ENST00000016946 PSMD12O00232 456 aaPredicted RBP11.33□□□□□ -0.6
RGPD5-201ENST00000016946 CPA3P15088 417 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 MGAT1P26572 445 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 DNAJC3Q13217 504 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 CHPFQ8IZ52 775 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 ICA1LQ8NDH6 482 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 LENG1Q96BZ8 264 aaPredicted RBP11.33□□□□□ -0.6
RGPD5-201ENST00000016946 THUMPD3Q9BV44 507 aaKnown RBP11.33□□□□□ -0.6
RGPD5-201ENST00000016946 ZCWPW1Q9H0M4 648 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 B2RBV5 119 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 TGFB1I1O43294 461 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 AKAP10O43572 662 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 NDUFS2O75306 463 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 ATAT1Q5SQI0 421 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 OSCP1Q8WVF1 389 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 MAGEB10Q96LZ2 347 aaPredicted RBP11.33□□□□□ -0.6
RGPD5-201ENST00000016946 MFSD14AQ96MC6 490 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 RPTORQ8N122 1335 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 CTSEP14091 401 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 XRCC4Q13426 336 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 IL17AQ16552 155 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 PARP6Q2NL67 630 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 GALNTL6Q49A17 601 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 TDRD5Q8NAT2 981 aaKnown RBP11.33□□□□□ -0.6
RGPD5-201ENST00000016946 ECSITQ9BQ95 431 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 AHSPQ9NZD4 102 aa11.33□□□□□ -0.6
RGPD5-201ENST00000016946 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
RGPD5-201ENST00000016946 WDR27A2RRH5 827 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 B4GALT4O60513 344 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 LGR5O75473 907 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 DGKIO75912 1065 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 PECAM1P16284 738 aaPredicted RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 GRK2P25098 689 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 SERPINH1P50454 418 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 HNRNPH2P55795 449 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 VSTM1Q6UX27 236 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 TSHZ1Q6ZSZ6 1077 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 TNIP2Q8NFZ5 429 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 ERLEC1Q96DZ1 483 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 GOLGA2P5Q9HBQ8 144 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 SFMBT1Q9UHJ3 866 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 DMGDHQ9UI17 866 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 ZNF214Q9UL59 606 aaPredicted RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 RAB23Q9ULC3 237 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 GPR25O00155 361 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 PDE2AO00408 941 aaPredicted RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 XPO1O14980 1071 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 NPAS4Q8IUM7 802 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 SLC22A9Q8IVM8 553 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 ATAD1Q8NBU5 361 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 HNRNPLLQ8WVV9 542 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 LTBP3Q9NS15 1303 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 PCNAP12004 261 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 CAPZA2P47755 286 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 MEA1Q16626 185 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 FAM46CQ5VWP2 391 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 TTC7BQ86TV6 843 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 TRAPPC5Q8IUR0 188 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 CATSPER1Q8NEC5 780 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 CLEC4DQ8WXI8 215 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 SNRNP25Q9BV90 132 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 SRRDQ9UH36 339 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 RAD51BO15315 384 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 ZNF862O60290 1169 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 CCNT2O60583 730 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 STAU1O95793 577 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 MLNP12872 115 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 ZNF473Q8WTR7 871 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 NLNQ9BYT8 704 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 BRD9Q9H8M2 597 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 L2HGDHQ9H9P8 463 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 COL20A1Q9P218 1284 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 TUBGCP4Q9UGJ1 667 aa11.32□□□□□ -0.6
RGPD5-201ENST00000016946 CDV3Q9UKY7 258 aaKnown RBP11.32□□□□□ -0.6
RGPD5-201ENST00000016946 DNPEPQ9ULA0 475 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms