RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 C2CD4DB7Z1M9 353 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 E9PAM4 449 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 ENC1O14682 589 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 SCAMP3O14828 347 aaKnown RBP13.38□□□□□ -0.27
PHGDH-218ENST00000641491 TSPAN3O60637 253 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 TCP1P17987 556 aaKnown RBP13.38□□□□□ -0.27
PHGDH-218ENST00000641491 GDI1P31150 447 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 TAS2R40P59535 323 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 COPS2P61201 443 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 ETF1P62495 437 aaKnown RBP13.38□□□□□ -0.27
PHGDH-218ENST00000641491 NHLH1Q02575 133 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 TFDP2Q14188 446 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 GRM2Q14416 872 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 MS4A13Q5J8X5 152 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 MEI1Q5TIA1 1274 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 OTUD1Q5VV17 481 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-218ENST00000641491 SYT10Q6XYQ8 523 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 TPGS1Q6ZTW0 290 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 MFSD6LQ8IWD5 586 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 BBS7Q8IWZ6 715 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 GJD3Q8N144 294 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 EXD1Q8NHP7 514 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 KIF18AQ8NI77 898 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 MAIP1Q8WWC4 291 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 IRF7Q92985 503 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 TMA16Q96EY4 203 aaKnown RBP13.38□□□□□ -0.27
PHGDH-218ENST00000641491 C1orf74Q96LT6 269 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 XPO6Q96QU8 1125 aaKnown RBP13.38□□□□□ -0.27
PHGDH-218ENST00000641491 ZNF670Q9BS34 389 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 IRX2Q9BZI1 471 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-218ENST00000641491 ZYG11BQ9C0D3 744 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 RCOR3Q9P2K3 495 aaPredicted RBP13.38□□□□□ -0.27
PHGDH-218ENST00000641491 PRKAG3Q9UGI9 489 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 HS3ST4Q9Y661 456 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 WNT6Q9Y6F9 365 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 NUMBLQ9Y6R0 609 aa13.38□□□□□ -0.27
PHGDH-218ENST00000641491 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-218ENST00000641491 GOLGA6L10A0A0M3HER8 536 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 H0Y626 953 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 ALADP13716 330 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 L1CAMP32004 1257 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 PAFAH1B1P43034 410 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 OXCT1P55809 520 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 PFKPQ01813 784 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 ZNF177Q13360 481 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-218ENST00000641491 AUHQ13825 339 aaKnown RBP13.37□□□□□ -0.27
PHGDH-218ENST00000641491 DPYSL2Q16555 572 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 C6orf118Q5T5N4 469 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 KAZNQ674X7 775 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 TANGO2Q6ICL3 276 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 PARM1Q6UWI2 310 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 RFX8Q6ZV50 586 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 NUDT18Q6ZVK8 323 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 BZW1Q7L1Q6 419 aaKnown RBP13.37□□□□□ -0.27
PHGDH-218ENST00000641491 BNIPLQ7Z465 357 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 ZDHHC14Q8IZN3 488 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 RNF25Q96BH1 459 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-218ENST00000641491 PBKQ96KB5 322 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 ZFRQ96KR1 1074 aaKnown RBP13.37□□□□□ -0.27
PHGDH-218ENST00000641491 PEBP4Q96S96 227 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 KCTD15Q96SI1 283 aaPredicted RBP13.37□□□□□ -0.27
PHGDH-218ENST00000641491 PSMB7Q99436 277 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 BBS2Q9BXC9 721 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 PRDM16Q9HAZ2 1276 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 CALCOCO1Q9P1Z2 691 aa13.37□□□□□ -0.27
PHGDH-218ENST00000641491 NEDD8-MDP1E9PL57 170 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 APOL1O14791 398 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 CHADO15335 359 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 CEP104O60308 925 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 TBL1XO60907 577 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 CLDN11O75508 207 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 NEBLO76041 1014 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 TJP3O95049 919 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 ADH5P11766 374 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 IL9P15248 144 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 KDELR1P24390 212 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 IL1R2P27930 398 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 GGCXP38435 758 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 VCPP55072 806 aaKnown RBP13.36□□□□□ -0.27
PHGDH-218ENST00000641491 MLLT6P55198 1093 aaPredicted RBP13.36□□□□□ -0.27
PHGDH-218ENST00000641491 GAD2Q05329 585 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 TFDP3Q5H9I0 405 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 PIK3R6Q5UE93 754 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 TMCO3Q6UWJ1 677 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 VITQ6UXI7 678 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 MFN1Q8IWA4 741 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 ADHFE1Q8IWW8 467 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 CPXM2Q8N436 756 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 CARNMT1Q8N4J0 409 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 BHMTQ93088 406 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 HES6Q96HZ4 224 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 CARD9Q9H257 536 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 RETREG1Q9H6L5 497 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 PCDH18Q9HCL0 1135 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 SPHK2Q9NRA0 654 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 LIMD1Q9UGP4 676 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 SAR1BQ9Y6B6 198 aa13.36□□□□□ -0.27
PHGDH-218ENST00000641491 A0A1B0GVM2 712 aa13.35□□□□□ -0.27
PHGDH-218ENST00000641491 TCAF2A6NFQ2 919 aa13.35□□□□□ -0.27
PHGDH-218ENST00000641491 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms