RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 EDEM2Q9BV94 578 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 TMEM121BQ9BXQ6 578 aaPredicted RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 DCLK3Q9C098 648 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 CEP295Q9C0D2 2601 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 MIS12Q9H081 205 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 NUCKS1Q9H1E3 243 aaKnown RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 THAP9Q9H5L6 903 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 ABCC13Q9NSE7 274 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 WSB2Q9NYS7 404 aaPredicted RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 LIMA1Q9UHB6 759 aaKnown RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 EVLQ9UI08 416 aaPredicted RBP8.16□□□□□ -1.1
PNKP-229ENST00000637897 PYCARDQ9ULZ3 195 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 CYP8B1Q9UNU6 501 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 ZNF510Q9Y2H8 683 aa8.16□□□□□ -1.1
PNKP-229ENST00000637897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.16□□□□□ -1.1
PNKP-229ENST00000637897 LRRC10BA6NIK2 292 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 E5RJQ4 531 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 FOXN3O00409 490 aaPredicted RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 ACSL4O60488 711 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 ALDH1A2O94788 518 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 GNA14O95837 355 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 IGLV3-19P01714 112 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 TFE3P19532 575 aaPredicted RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 SDHBP21912 280 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 EEF1GP26641 437 aaKnown RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 CHKAP35790 457 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 CTSOP43234 321 aaPredicted RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 TERF1P54274 439 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 YWHAEP62258 255 aaKnown RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 ZNF33AQ06730 810 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 GOLGA8FQ08AF8 430 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 GOLGA8DPQ0D2H9 430 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 LMAN2Q12907 356 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 NR1I3Q14994 352 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 TRIM61Q5EBN2 209 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 ADGRF1Q5T601 910 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 TRNP1Q6NT89 227 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 SLC23A3Q6PIS1 610 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 RSRC2Q7L4I2 434 aaKnown RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 CYP2U1Q7Z449 544 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 ANKS1BQ7Z6G8 1248 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 PIP4P1Q86T03 277 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 TADA2BQ86TJ2 420 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 METTL3Q86U44 580 aaKnown RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 SYT12Q8IV01 421 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 FAM114A1Q8IWE2 563 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 SIX6OS1Q8N1H7 587 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 C12orf50Q8NA57 414 aaPredicted RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 DDI1Q8WTU0 396 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 CPXM1Q96SM3 734 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 PRMT1Q99873 361 aaKnown RBP8.15□□□□□ -1.1
PNKP-229ENST00000637897 ITM2CQ9NQX7 267 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 KCND1Q9NSA2 647 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 ABCB8Q9NUT2 735 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 BCCIPQ9P287 314 aaKnown RBP eCLIP8.15□□□□□ -1.1
PNKP-229ENST00000637897 HESX1Q9UBX0 185 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 STRIP2Q9ULQ0 834 aa8.15□□□□□ -1.1
PNKP-229ENST00000637897 AKAP13Q12802 2813 aa8.15□□□□□ -1.11
PNKP-229ENST00000637897 IGF2RP11717 2491 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 ITIH6Q6UXX5 1313 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 FAM170AA1A519 330 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 KCNU1A8MYU2 1149 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 RNF103O00237 685 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 KHNYNO15037 678 aaKnown RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 IRAK2O43187 625 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 CCP110O43303 1012 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 FGFR1OPO95684 399 aaKnown RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 LATS1O95835 1130 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 ERBB2P04626 1255 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 TPM2P07951 284 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 TPM1P09493 284 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 ENGP17813 658 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 NUMBP49757 651 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 TPMTP51580 245 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 TBX4P57082 545 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 CCZ1BP86790 482 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 CCZ1P86791 482 aaPredicted RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 RPL6Q02878 288 aaKnown RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 RING1Q06587 406 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 TBX2Q13207 712 aaPredicted RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 PDCLQ13371 301 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 CAMK2GQ13555 558 aaPredicted RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 KCNJ12Q14500 433 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 ARHGAP44Q17R89 818 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 PTPN20Q4JDL3 420 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 MPPE1Q53F39 396 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 HSP90AA4PQ58FG1 418 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 DCAF6Q58WW2 860 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 ZC3H12AQ5D1E8 599 aaKnown RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 TCP11X2Q5H9J9 407 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 MS4A13Q5J8X5 152 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 SPDYCQ5MJ68 293 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 DNTTIP2Q5QJE6 756 aaKnown RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 LYSMD4Q5XG99 296 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 PSAPL1Q6NUJ1 521 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 CHST9Q7L1S5 443 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 BEND5Q7L4P6 421 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 LPCAT2Q7L5N7 544 aa8.14□□□□□ -1.11
PNKP-229ENST00000637897 APTXQ7Z2E3 356 aaKnown RBP8.14□□□□□ -1.11
PNKP-229ENST00000637897 TRMT11Q7Z4G4 463 aaKnown RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms