RNA–Protein interactions for RNA: ENST00000636751.2

TCF4-280, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 8,283 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-280	ENST00000636751	HERVK_113	Q902F9	699 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	USP7	Q93009	1102 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ALKBH8	Q96BT7	664 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	STAMBPL1	Q96FJ0	436 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	TMEM237	Q96Q45	408 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	WNT8A	Q9H1J5	351 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SLC6A15	Q9H2J7	730 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PDE11A	Q9HCR9	933 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SNCAIP	Q9Y6H5	919 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751		A0A1W2PQJ5	194 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PRR5-ARHGAP8	B1AHC4	643 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ZSCAN9	O15535	394 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PPP1R37	O75864	691 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	INHA	P05111	366 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	USP17L7	P0C7H9	530 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	GSPT1	P15170	499 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ITGAX	P20702	1163 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	HSF2	Q03933	536 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	GFPT1	Q06210	699 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PDK2	Q15119	407 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	RNF151	Q2KHN1	245 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ZSCAN23	Q3MJ62	389 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	C4orf46	Q504U0	113 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	EPC2	Q52LR7	807 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	C6orf183	Q5T699	404 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	STX19	Q8N4C7	294 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	LENG9	Q96B70	501 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PPWD1	Q96BP3	646 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	CITED4	Q96RK1	184 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	TIMMDC1	Q9NPL8	285 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	KLHL14	Q9P2G3	628 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SCML1	Q9UN30	329 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SOX13	Q9UN79	622 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PHF24	Q9UPV7	400 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	BTBD18	B2RXH4	712 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	NMT2	O60551	498 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	MTX2	O75431	263 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SEC31A	O94979	1220 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	APOL3	O95236	402 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SNAP47	Q5SQN1	464 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	CDKL3	Q8IVW4	592 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SUN3	Q8TAQ9	357 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ARMC5	Q96C12	935 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	TSPAN17	Q96FV3	270 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ZBED3	Q96IU2	234 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	TGS1	Q96RS0	853 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	P2RX7	Q99572	595 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	C2orf49	Q9BVC5	232 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	CELF4	Q9BZC1	486 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	KLC2	Q9H0B6	622 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	UBIAD1	Q9Y5Z9	338 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	DENND4A	Q7Z401	1863 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	DOCK8	Q8NF50	2099 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	MEN1	O00255	615 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	BIRC5	O15392	142 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	KCNH1	O95259	989 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	MYCLP1	P12525	358 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ARPP19	P56211	112 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PEX3	P56589	373 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PPARD	Q03181	441 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	HNRNPD	Q14103	355 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	TRADD	Q15628	312 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	BOLA3	Q53S33	107 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	FBXO47	Q5MNV8	452 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PYHIN1	Q6K0P9	492 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ALKBH2	Q6NS38	261 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PEX26	Q7Z412	305 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	MYO1H	Q8N1T3	1032 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	BEND7	Q8N7W2	519 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PIGK	Q92643	395 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	BARD1	Q99728	777 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SSX3	Q99909	188 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	FKBP14	Q9NWM8	211 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SSU72P8	A0A1W2PR75	194 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	TEX28	O15482	410 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PQBP1	O60828	265 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	CCNB2	O95067	398 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	LGALS2	P05162	132 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	WEE2	P0C1S8	567 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ITGAL	P20701	1170 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	STOM	P27105	288 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	GCNT1	Q02742	428 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	YWHAH	Q04917	246 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	FBXO43	Q4G163	708 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	RSPO2	Q6UXX9	243 aa	Predicted RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	KDELC2	Q7Z4H8	507 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	DYNLL2	Q96FJ2	89 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	HSFY1	Q96LI6	401 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	TCEANC2	Q96MN5	208 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	DEPDC7	Q96QD5	511 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	OSBPL11	Q9BXB4	747 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	PACSIN1	Q9BY11	444 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	SCUBE2	Q9NQ36	999 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	CCDC59	Q9P031	241 aa	Known RBP	4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	CPA4	Q9UI42	421 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ADM5	C9JUS6	153 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	NDUFB5	O43674	189 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	FES	P07332	822 aa		4.94	□□□□□ -1.62
TCF4-280	ENST00000636751	ALAD	P13716	330 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms