RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 FCRL2Q96LA5 508 aaPredicted RBP18.6■□□□□ 0.57
PNKP-225ENST00000636214 SLC4A5Q9BY07 1137 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 LHX5Q9H2C1 402 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 CLSTN2Q9H4D0 955 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 THAP9Q9H5L6 903 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 SUN2Q9UH99 717 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 CEP83Q9Y592 693 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 ADAMTS9Q9P2N4 1935 aa18.6■□□□□ 0.57
PNKP-225ENST00000636214 MAP1BP46821 2468 aaKnown RBP18.6■□□□□ 0.57
PNKP-225ENST00000636214 CEP295Q9C0D2 2601 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 ARHGAP33O14559 1287 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 PRKCSHP14314 528 aaPredicted RBP18.59■□□□□ 0.57
PNKP-225ENST00000636214 PMLP29590 882 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 SLC6A4P31645 630 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 YWHAZP63104 245 aaKnown RBP18.59■□□□□ 0.57
PNKP-225ENST00000636214 PDCLQ13371 301 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 MAN2A1Q16706 1144 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 CHSY1Q86X52 802 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 MINDY1Q8N5J2 469 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 ATP6V0D2Q8N8Y2 350 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 DEFB124Q8NES8 71 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 CADM4Q8NFZ8 388 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 RNF34Q969K3 372 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 MIR1-1HGQ9H1L0 117 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 SYNCQ9H7C4 482 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 FAM204AQ9H8W3 233 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 CAPN10Q9HC96 672 aa18.59■□□□□ 0.57
PNKP-225ENST00000636214 PCNX2A6NKB5 2137 aa18.58■□□□□ 0.57
PNKP-225ENST00000636214 H0Y626 953 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 GIPC1O14908 333 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 PAPSS1O43252 624 aaPredicted RBP18.58■□□□□ 0.56
PNKP-225ENST00000636214 TRUB2O95900 331 aaKnown RBP18.58■□□□□ 0.56
PNKP-225ENST00000636214 DNTTP04053 509 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 ASLP04424 464 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 SLC2A3P11169 496 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 CD70P32970 193 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 KRT9P35527 623 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 ANP32AP39687 249 aaKnown RBP18.58■□□□□ 0.56
PNKP-225ENST00000636214 COPAP53621 1224 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 CDK17Q00537 523 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 CAMK2GQ13555 558 aaPredicted RBP18.58■□□□□ 0.56
PNKP-225ENST00000636214 NADSYN1Q6IA69 706 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 TMEM110Q86TL2 294 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 ADIPOR2Q86V24 386 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 FAM124AQ86V42 546 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 LGI2Q8N0V4 545 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 ZNF366Q8N895 744 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 FIBINQ8TAL6 211 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 SNX19Q92543 992 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 NUCKS1Q9H1E3 243 aaKnown RBP18.58■□□□□ 0.56
PNKP-225ENST00000636214 NUP62CLQ9H1M0 184 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 PDCL3Q9H2J4 239 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 FSCN3Q9NQT6 498 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 NFE2L3Q9Y4A8 694 aa18.58■□□□□ 0.56
PNKP-225ENST00000636214 A0A1B0GTW7 788 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 F5H5T6 163 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 RNASEH1O60930 286 aaKnown RBP18.57■□□□□ 0.56
PNKP-225ENST00000636214 FYNP06241 537 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 ABCB4P21439 1286 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 PON1P27169 355 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 MAOBP27338 520 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 RDXP35241 583 aaKnown RBP18.57■□□□□ 0.56
PNKP-225ENST00000636214 RPS24P62847 133 aaKnown RBP18.57■□□□□ 0.56
PNKP-225ENST00000636214 ZBTB16Q05516 673 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 SFSWAPQ12872 951 aaKnown RBP18.57■□□□□ 0.56
PNKP-225ENST00000636214 DCAF6Q58WW2 860 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 ZC3H12AQ5D1E8 599 aaKnown RBP18.57■□□□□ 0.56
PNKP-225ENST00000636214 MS4A13Q5J8X5 152 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 EFHC1Q5JVL4 640 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 DCAF12L1Q5VU92 463 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 SYPL2Q5VXT5 272 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 RNF219Q5W0B1 726 aaPredicted RBP18.57■□□□□ 0.56
PNKP-225ENST00000636214 SMYD5Q6GMV2 418 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 KIAA0907Q7Z7F0 614 aaPredicted RBP18.57■□□□□ 0.56
PNKP-225ENST00000636214 PASD1Q8IV76 773 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 WFDC5Q8TCV5 224 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 GANCQ8TET4 914 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 SHC3Q92529 594 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 SLC39A13Q96H72 371 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 PPP1R13BQ96KQ4 1090 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 BTN2A3PQ96KV6 586 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 PRICKLE1Q96MT3 831 aaPredicted RBP18.57■□□□□ 0.56
PNKP-225ENST00000636214 ZDHHC5Q9C0B5 715 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 TMEM245Q9H330 911 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 ACP6Q9NPH0 428 aa18.57■□□□□ 0.56
PNKP-225ENST00000636214 SYNJ2BP-COX16A0A087WUM0 186 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 BECN2A8MW95 431 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 KCNJ18B7U540 433 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 HSF2BPO75031 334 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 LUC7L3O95232 432 aaKnown RBP18.56■□□□□ 0.56
PNKP-225ENST00000636214 GLI1P08151 1106 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 ERCC5P28715 1186 aaPredicted RBP18.56■□□□□ 0.56
PNKP-225ENST00000636214 BPIFB4P59827 614 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 SHC2P98077 582 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 FOXC1Q12948 553 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 RABGAP1LQ5R372 815 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 RAP1GAP2Q684P5 730 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 ZNF776Q68DI1 518 aaPredicted RBP18.56■□□□□ 0.56
PNKP-225ENST00000636214 OR6B2Q6IFH4 312 aa18.56■□□□□ 0.56
PNKP-225ENST00000636214 ZCCHC9Q8N567 271 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms