RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 DDX50Q9BQ39 737 aaKnown RBP15.25■□□□□ 0.03
PNKP-221ENST00000627317 WDCPQ9H6R7 721 aa15.25■□□□□ 0.03
PNKP-221ENST00000627317 RIF1Q5UIP0 2472 aaKnown RBP15.24■□□□□ 0.03
PNKP-221ENST00000627317 K7ESF4 209 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 ACSL4O60488 711 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 LILRB5O75023 590 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 RNF8O76064 485 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 ENDOD1O94919 500 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 CYP17A1P05093 508 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 CHRM1P11229 460 aaPredicted RBP15.24■□□□□ 0.03
PNKP-221ENST00000627317 CHKAP35790 457 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 HDAC4P56524 1084 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 SATB1Q01826 763 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 CSTF1Q05048 431 aaKnown RBP15.24■□□□□ 0.03
PNKP-221ENST00000627317 ZNF252P-AS1Q0IIN9 211 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 CCDC173Q0VFZ6 552 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 ARL13BQ3SXY8 428 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 ADGRF1Q5T601 910 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 SH3PXD2AQ5TCZ1 1133 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 PKN3Q6P5Z2 889 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 TSSK4Q6SA08 328 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 BNIPLQ7Z465 357 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 CHSY1Q86X52 802 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 CENPIQ92674 756 aaPredicted RBP15.24■□□□□ 0.03
PNKP-221ENST00000627317 NKD2Q969F2 451 aaPredicted RBP15.24■□□□□ 0.03
PNKP-221ENST00000627317 AZIN2Q96A70 460 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 DESI2Q9BSY9 194 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 TKTL2Q9H0I9 626 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 SPHK2Q9NRA0 654 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 IP6K2Q9UHH9 426 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 PCDHGA2Q9Y5H1 932 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 FANCMQ8IYD8 2048 aa15.24■□□□□ 0.03
PNKP-221ENST00000627317 KCNU1A8MYU2 1149 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 MYO1FO00160 1098 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 EGFP01133 1207 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 ADH5P11766 374 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 OPRD1P41143 372 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 CCR3P51677 355 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 VAV2P52735 878 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 CCZ1BP86790 482 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 CCZ1P86791 482 aaPredicted RBP15.23■□□□□ 0.03
PNKP-221ENST00000627317 PIGHQ14442 188 aaPredicted RBP15.23■□□□□ 0.03
PNKP-221ENST00000627317 DHCR24Q15392 516 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 ANO4Q32M45 955 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 RAB6CQ53S08 254 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 LY6G5CQ5SRR4 150 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 SCYL2Q6P3W7 929 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 TPGS1Q6ZTW0 290 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 ADGRG2Q8IZP9 1017 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 CPXM2Q8N436 756 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 SUMF1Q8NBK3 374 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 SLC35G2Q8TBE7 412 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 BTBD6Q96KE9 485 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 P2RY13Q9BPV8 354 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 NCAPGQ9BPX3 1015 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 RAB6CQ9H0N0 254 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 SEMA4AQ9H3S1 761 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 ZSCAN32Q9NX65 697 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 ARHGEF38Q9NXL2 777 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 XPO7Q9UIA9 1087 aaKnown RBP15.23■□□□□ 0.03
PNKP-221ENST00000627317 LCMT1Q9UIC8 334 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 REXO2Q9Y3B8 237 aaKnown RBP15.23■□□□□ 0.03
PNKP-221ENST00000627317 OTOGLQ3ZCN5 2332 aa15.23■□□□□ 0.03
PNKP-221ENST00000627317 TYW5A2RUC4 315 aaKnown RBP15.22■□□□□ 0.03
PNKP-221ENST00000627317 TSPAN3O60637 253 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 PAGE1O75459 146 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 CYBBP04839 570 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 NOP2P46087 812 aaKnown RBP15.22■□□□□ 0.03
PNKP-221ENST00000627317 GALK1P51570 392 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 MESP2Q0VG99 397 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 GRSF1Q12849 480 aaKnown RBP eCLIP15.22■□□□□ 0.03
PNKP-221ENST00000627317 ACAP1Q15027 740 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 FAM133BQ5BKY9 247 aaKnown RBP15.22■□□□□ 0.03
PNKP-221ENST00000627317 RAP1GAP2Q684P5 730 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 NADSYN1Q6IA69 706 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 RHBDF2Q6PJF5 856 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 ZC3H14Q6PJT7 736 aaKnown RBP15.22■□□□□ 0.03
PNKP-221ENST00000627317 TMEM25Q86YD3 366 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 FAM217AQ8IXS0 508 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 BHMTQ93088 406 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 BBS2Q9BXC9 721 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 FAM126AQ9BYI3 521 aaPredicted RBP15.22■□□□□ 0.03
PNKP-221ENST00000627317 OSGEPQ9NPF4 335 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 STOML2Q9UJZ1 356 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 TFR2Q9UP52 801 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 DMXL1Q9Y485 3027 aa15.22■□□□□ 0.03
PNKP-221ENST00000627317 A0A0A6YYK5 440 aaPredicted RBP15.21■□□□□ 0.03
PNKP-221ENST00000627317 GOLGA6L7A0A1B0GV03 622 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 TMEM110-MUSTN1A8MSY1 372 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 CHURC1-FNTBB4DL54 471 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 NEDD8-MDP1E9PL57 170 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 F5H5T6 163 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 HOXC11O43248 304 aaPredicted RBP15.21■□□□□ 0.03
PNKP-221ENST00000627317 PRPSAP2O60256 369 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 MTA2O94776 668 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 PROSCO94903 275 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 TACR2P21452 398 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 DRD1P21728 446 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 HOXA6P31267 233 aa15.21■□□□□ 0.03
PNKP-221ENST00000627317 HOXC13P31276 330 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms