RNA–Protein interactions for RNA: ENST00000622277.4

SNX12-207, Transcript of sorting nexin 12, humanhuman

APPRIS P3 TSL 4 BASIC

Gene SNX12, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-207ENST00000622277 PM20D1Q6GTS8 502 aa13.15□□□□□ -0.3
SNX12-207ENST00000622277 UNC5AQ6ZN44 842 aa13.15□□□□□ -0.3
SNX12-207ENST00000622277 DENND5BQ6ZUT9 1274 aa13.15□□□□□ -0.3
SNX12-207ENST00000622277 SH2D5Q6ZV89 423 aa13.15□□□□□ -0.3
SNX12-207ENST00000622277 ZNF598Q86UK7 904 aaKnown RBP13.15□□□□□ -0.3
SNX12-207ENST00000622277 SLC26A11Q86WA9 606 aa13.15□□□□□ -0.3
SNX12-207ENST00000622277 PCSK9Q8NBP7 692 aaKnown RBP13.15□□□□□ -0.3
SNX12-207ENST00000622277 SPDL1Q96EA4 605 aa13.15□□□□□ -0.3
SNX12-207ENST00000622277 EBNA1BP2Q99848 306 aaKnown RBP13.15□□□□□ -0.3
SNX12-207ENST00000622277 PAIP2Q9BPZ3 127 aaKnown RBP13.15□□□□□ -0.3
SNX12-207ENST00000622277 ANLNQ9NQW6 1124 aa13.15□□□□□ -0.3
SNX12-207ENST00000622277 TRIM33Q9UPN9 1127 aa13.15□□□□□ -0.3
SNX12-207ENST00000622277 I6L893 689 aaPredicted RBP13.14□□□□□ -0.31
SNX12-207ENST00000622277 RNF103O00237 685 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 LIN7AO14910 233 aaPredicted RBP13.14□□□□□ -0.31
SNX12-207ENST00000622277 CREB3O43889 395 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 SMNDC1O75940 238 aaKnown RBP eCLIP13.14□□□□□ -0.31
SNX12-207ENST00000622277 UNC5CO95185 931 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 APOEP02649 317 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 MT-ND3P03897 115 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
SNX12-207ENST00000622277 MLNP12872 115 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 BRCC3P46736 316 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 IRX1P78414 480 aaPredicted RBP13.14□□□□□ -0.31
SNX12-207ENST00000622277 SLC18A2Q05940 514 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 FAAP100Q0VG06 881 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 HHATQ5VTY9 493 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 LVRNQ6Q4G3 990 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 ECHDC2Q86YB7 292 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 ANKLE1Q8NAG6 615 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 P2RY11Q96G91 374 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 RHOBTB2Q9BYZ6 727 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 STARD13Q9Y3M8 1113 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 IKBKGQ9Y6K9 419 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 FAM72CH0Y354 149 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 B3GAT3O94766 335 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 STK10O94804 968 aaKnown RBP13.14□□□□□ -0.31
SNX12-207ENST00000622277 F9P00740 461 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 NCAM1P13591 858 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 NEK3P51956 506 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 FAM72AQ5TYM5 149 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 FAM72DQ6L9T8 149 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 FAM72BQ86X60 149 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 PATJQ8NI35 1801 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 RSPH1Q8WYR4 309 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 SERAC1Q96JX3 654 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 PITPNM3Q9BZ71 974 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 NR2E3Q9Y5X4 410 aa13.14□□□□□ -0.31
SNX12-207ENST00000622277 TDRD15B5MCY1 1934 aaKnown RBP13.14□□□□□ -0.31
SNX12-207ENST00000622277 FAM159BA6NKW6 160 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 CXorf49A8MYA2 514 aaPredicted RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 CABYRO75952 493 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 AMHP03971 560 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 ELNP15502 786 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 CXCR3P49682 368 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 CCNHP51946 323 aaPredicted RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 SARNPP82979 210 aaKnown RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 WASHC5Q12768 1159 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 TTC39BQ5VTQ0 682 aaPredicted RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 STEAP4Q687X5 459 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 CTU1Q7Z7A3 348 aaKnown RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 LRRC6Q86X45 466 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 MPP5Q8N3R9 675 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 COLGALT1Q8NBJ5 622 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 OR10T2Q8NGX3 314 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 GSDMBQ8TAX9 411 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 ADAM32Q8TC27 787 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 APOPT1Q96IL0 206 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 SUSD3Q96L08 255 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 ANKRD27Q96NW4 1050 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 RAB3IPQ96QF0 476 aaPredicted RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 FERMT1Q9BQL6 677 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 PRDM12Q9H4Q4 367 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 DMAP1Q9NPF5 467 aaPredicted RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 SMYD2Q9NRG4 433 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 TRMT13Q9NUP7 481 aaKnown RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 TMLHEQ9NVH6 421 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 DDIT4Q9NX09 232 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 PCDHA11Q9Y5I1 949 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 FRMPD3Q5JV73 1810 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 EDF1O60869 148 aaKnown RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 LUC7L3O95232 432 aaKnown RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 ERCC2P18074 760 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 TYMPP19971 482 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 GRIA1P42261 906 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 AP1B1Q10567 949 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 DNAJC3Q13217 504 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 BLMHQ13867 455 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 PAN2Q504Q3 1202 aaKnown RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 NAIF1Q69YI7 327 aaPredicted RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 CAPRIN2Q6IMN6 1127 aaKnown RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 CYS1Q717R9 158 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 PDZD4Q76G19 769 aaPredicted RBP13.13□□□□□ -0.31
SNX12-207ENST00000622277 BEND5Q7L4P6 421 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 ZNF276Q8N554 614 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 PPM1NQ8N819 430 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 TCP10LQ8TDR4 215 aa13.13□□□□□ -0.31
SNX12-207ENST00000622277 LRRC8CQ8TDW0 803 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms