RNA–Protein interactions for RNA: ENST00000620789.4

LITAF-220, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-220ENST00000620789 MAML2Q8IZL2 1156 aaPredicted RBP18.92■□□□□ 0.62
LITAF-220ENST00000620789 RPLP0P6Q8NHW5 317 aa18.92■□□□□ 0.62
LITAF-220ENST00000620789 USP33Q8TEY7 942 aa18.92■□□□□ 0.62
LITAF-220ENST00000620789 FAM172AQ8WUF8 416 aa18.92■□□□□ 0.62
LITAF-220ENST00000620789 ANLNQ9NQW6 1124 aa18.92■□□□□ 0.62
LITAF-220ENST00000620789 PRMT8Q9NR22 394 aaPredicted RBP18.92■□□□□ 0.62
LITAF-220ENST00000620789 NENFQ9UMX5 172 aa18.92■□□□□ 0.62
LITAF-220ENST00000620789 HS3ST4Q9Y661 456 aa18.92■□□□□ 0.62
LITAF-220ENST00000620789 SCINQ9Y6U3 715 aa18.92■□□□□ 0.62
LITAF-220ENST00000620789 ANTXRLA6NF34 631 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 PRRT4C9JH25 899 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 I6L893 689 aaPredicted RBP18.91■□□□□ 0.62
LITAF-220ENST00000620789 CHRM1P11229 460 aaPredicted RBP18.91■□□□□ 0.62
LITAF-220ENST00000620789 KIR2DL1P43626 348 aaPredicted RBP18.91■□□□□ 0.62
LITAF-220ENST00000620789 CXCL12P48061 93 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 PTPN5P54829 565 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 MRPS21P82921 87 aaKnown RBP18.91■□□□□ 0.62
LITAF-220ENST00000620789 SLC18A3Q16572 532 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 ASTE1Q2TB18 679 aaPredicted RBP18.91■□□□□ 0.62
LITAF-220ENST00000620789 RAB6CQ53S08 254 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 C2orf27AQ580R0 203 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 CCDC122Q5T0U0 273 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 ANKS1BQ7Z6G8 1248 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 CFAP52Q8N1V2 620 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 ZNF557Q8N988 423 aaPredicted RBP18.91■□□□□ 0.62
LITAF-220ENST00000620789 TC2NQ8N9U0 490 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 CNPY3Q9BT09 278 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 RAB6CQ9H0N0 254 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 DEF6Q9H4E7 631 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 STIM2Q9P246 746 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 FBXO4Q9UKT5 387 aa18.91■□□□□ 0.62
LITAF-220ENST00000620789 H0Y858 1186 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 CCP110O43303 1012 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 PAPSS2O95340 614 aaPredicted RBP18.9■□□□□ 0.62
LITAF-220ENST00000620789 HDAC4P56524 1084 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 SATB1Q01826 763 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 GFPT1Q06210 699 aaPredicted RBP18.9■□□□□ 0.62
LITAF-220ENST00000620789 AUHQ13825 339 aaKnown RBP18.9■□□□□ 0.62
LITAF-220ENST00000620789 GEN1Q17RS7 908 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 RABGAP1LQ5R372 815 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 ACBD5Q5T8D3 534 aaPredicted RBP18.9■□□□□ 0.62
LITAF-220ENST00000620789 EMC10Q5UCC4 262 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 TTC39BQ5VTQ0 682 aaPredicted RBP18.9■□□□□ 0.62
LITAF-220ENST00000620789 FBXL22Q6P050 247 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 MFN1Q8IWA4 741 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 KCNV2Q8TDN2 545 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 ACDQ96AP0 544 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 CHP1Q99653 195 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 SIK2Q9H0K1 926 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 MRPL47Q9HD33 250 aaKnown RBP18.9■□□□□ 0.62
LITAF-220ENST00000620789 TMPRSS4Q9NRS4 437 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 C2orf42Q9NWW7 574 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 MYO1AQ9UBC5 1043 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 STARD13Q9Y3M8 1113 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 ARIH1Q9Y4X5 557 aaPredicted RBP18.9■□□□□ 0.62
LITAF-220ENST00000620789 CACNA1IQ9P0X4 2223 aa18.9■□□□□ 0.62
LITAF-220ENST00000620789 TMEM191CA6NGB0 347 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 DESP17661 470 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 HLA-FP30511 346 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 TIE1P35590 1138 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 GGCXP38435 758 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 OGDHQ02218 1023 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 ARL13BQ3SXY8 428 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 HSF5Q4G112 596 aaPredicted RBP18.89■□□□□ 0.61
LITAF-220ENST00000620789 SYT13Q7L8C5 426 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 CARNMT1Q8N4J0 409 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.89■□□□□ 0.61
LITAF-220ENST00000620789 IL17RCQ8NAC3 791 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 FIBINQ8TAL6 211 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 WFDC5Q8TCV5 224 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 C1orf74Q96LT6 269 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 RPRD1AQ96P16 312 aaPredicted RBP18.89■□□□□ 0.61
LITAF-220ENST00000620789 HAPLN3Q96S86 360 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 THAP2Q9H0W7 228 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 NHEJ1Q9H9Q4 299 aaPredicted RBP18.89■□□□□ 0.61
LITAF-220ENST00000620789 ABCB8Q9NUT2 735 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 VANGL2Q9ULK5 521 aa18.89■□□□□ 0.61
LITAF-220ENST00000620789 ATG2BQ96BY7 2078 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 AKR1B10O60218 316 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 LUC7L3O95232 432 aaKnown RBP18.88■□□□□ 0.61
LITAF-220ENST00000620789 ADRA1BP35368 520 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 CSTF1Q05048 431 aaKnown RBP18.88■□□□□ 0.61
LITAF-220ENST00000620789 CDH18Q13634 790 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 ZNF528Q3MIS6 628 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 C5orf22Q49AR2 442 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 KIAA0907Q7Z7F0 614 aaPredicted RBP18.88■□□□□ 0.61
LITAF-220ENST00000620789 C14orf80Q86SX3 495 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 CCDC117Q8IWD4 279 aaPredicted RBP18.88■□□□□ 0.61
LITAF-220ENST00000620789 ALLCQ8N6M5 410 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 ZNF513Q8N8E2 541 aaPredicted RBP18.88■□□□□ 0.61
LITAF-220ENST00000620789 WFIKKN2Q8TEU8 576 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 FNIP1Q8TF40 1166 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 IGSF8Q969P0 613 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 CCDC42Q96M95 316 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 IRF2BPLQ9H1B7 796 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 GGA2Q9UJY4 613 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 HCN2Q9UL51 889 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 MMP17Q9ULZ9 603 aa18.88■□□□□ 0.61
LITAF-220ENST00000620789 A0A1B0GVM2 712 aa18.87■□□□□ 0.61
LITAF-220ENST00000620789 TCAF2A6NFQ2 919 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms