RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ISCUQ9H1K1 167 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 EPC1Q9H2F5 836 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 FAM204AQ9H8W3 233 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 POLR3BQ9NW08 1133 aaPredicted RBP8.55□□□□□ -1.04
NEK3-209ENST00000618856 TAS2R14Q9NYV8 317 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 THAP10Q9P2Z0 257 aaPredicted RBP8.55□□□□□ -1.04
NEK3-209ENST00000618856 HS3ST4Q9Y661 456 aa8.55□□□□□ -1.04
NEK3-209ENST00000618856 BZW2Q9Y6E2 419 aaKnown RBP8.55□□□□□ -1.04
NEK3-209ENST00000618856 IGLV3-10A0A075B6K4 115 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 GOLGA8SH3BPF8 625 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 CBFA2T2O43439 604 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 TIMM44O43615 452 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 TSPAN3O60637 253 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 PAGE1O75459 146 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 ADCY5O95622 1261 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 SERPING1P05155 500 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 TPM3P06753 285 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 KRT3P12035 628 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 ABCB4P21439 1286 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 TNFAIP3P21580 790 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 RRM1P23921 792 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 NTSR1P30989 418 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 RDXP35241 583 aaKnown RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 RFC1P35251 1148 aaPredicted RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 DGKEP52429 567 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 PLK1P53350 603 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 RPS24P62847 133 aaKnown RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 TBX2Q13207 712 aaPredicted RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 AUHQ13825 339 aaKnown RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 PTPRNQ16849 979 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 ASTE1Q2TB18 679 aaPredicted RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 C2orf27AQ580R0 203 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 C10orf76Q5T2E6 689 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 TTC39BQ5VTQ0 682 aaPredicted RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 EGFLAMQ63HQ2 1017 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 SPECC1LQ69YQ0 1117 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 FBXL22Q6P050 247 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 WDR59Q6PJI9 974 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 ZC3H14Q6PJT7 736 aaKnown RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 TRMT11Q7Z4G4 463 aaKnown RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 ANKS1BQ7Z6G8 1248 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 VSTM4Q8IW00 320 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 ALLCQ8N6M5 410 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 EMC1Q8N766 993 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 WFDC5Q8TCV5 224 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 WFIKKN2Q8TEU8 576 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 RXFP2Q8WXD0 754 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 IGSF8Q969P0 613 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 TTC17Q96AE7 1141 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 CFAP57Q96MR6 1250 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 HAPLN3Q96S86 360 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 ACOX2Q99424 681 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 DNAJC7Q99615 494 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 METTL5Q9NRN9 209 aaKnown RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 FAM86C1Q9NVL1 165 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 ELOVL2Q9NXB9 296 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 ZNF212Q9UDV6 495 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 SLC12A6Q9UHW9 1150 aa8.54□□□□□ -1.04
NEK3-209ENST00000618856 LUC7L2Q9Y383 392 aaKnown RBP8.54□□□□□ -1.04
NEK3-209ENST00000618856 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.54□□□□□ -1.04
NEK3-209ENST00000618856 OTOGLQ3ZCN5 2332 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 PRR23AA6NEV1 266 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 HRO43593 1189 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 TBL1XO60907 577 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 RTN2O75298 545 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 LUC7L3O95232 432 aaKnown RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 GJB6O95452 261 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 KLF8O95600 359 aaPredicted RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 APBB3O95704 486 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 SKILP12757 684 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 PDGFRAP16234 1089 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 CASP14P31944 242 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 CD70P32970 193 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 TIE1P35590 1138 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 FNTBP49356 437 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 SULT1E1P49888 294 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 ZNF143P52747 638 aaPredicted RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 ATXN1P54253 815 aaKnown RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 SEC13P55735 322 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 HDAC4P56524 1084 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 RNASE9P60153 205 aaKnown RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 RPL7AP62424 266 aaKnown RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 DEUP1Q05D60 604 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 KLHL30Q0D2K2 578 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 SCAPQ12770 1279 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 NME3Q13232 169 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 MAMLD1Q13495 774 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 SLC12A1Q13621 1099 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 TRIM14Q14142 442 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 E2F5Q15329 346 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 RAB6CQ53S08 254 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 FSCBQ5H9T9 825 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 EOGTQ5NDL2 527 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 SH3PXD2AQ5TCZ1 1133 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 MANEALQ5VSG8 457 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 RAP1GAP2Q684P5 730 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 CXorf57Q6NSI4 855 aaKnown RBP8.53□□□□□ -1.04
NEK3-209ENST00000618856 CHST9Q7L1S5 443 aa8.53□□□□□ -1.04
NEK3-209ENST00000618856 ASCL5Q7RTU5 278 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms