RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 COMMD3-BMI1R4GMX3 469 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SMIM31A0A1B0GVY4 71 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OPLAHO14841 1288 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 WARSP23381 471 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 PTGIRP43119 386 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SULT1E1P49888 294 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 AP1S2P56377 157 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PRKCEQ02156 737 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ZRANB3Q5FWF4 1079 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RAVER1Q8IY67 606 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ZCCHC7Q8N3Z6 543 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 HSFY1Q96LI6 401 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HSD17B14Q9BPX1 270 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 COLEC11Q9BWP8 271 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 OSBPL11Q9BXB4 747 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RSPH9Q9H1X1 276 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 VTA1Q9NP79 307 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 IARS2Q9NSE4 1012 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ACOT9Q9Y305 439 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CYB561D2O14569 222 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TRIM24O15164 1050 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CD53P19397 219 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ANXA11P50995 505 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ZNF157P51786 506 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 FKBP1AP62942 108 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ENPEPQ07075 957 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ZNF235Q14590 738 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CCDC85BQ15834 202 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 PHF13Q86YI8 300 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 LRRC49Q8IUZ0 686 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 AADATQ8N5Z0 425 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ZSCAN18Q8TBC5 510 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 NAT14Q8WUY8 206 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TOP1MTQ969P6 601 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PTCD3Q96EY7 689 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 ABHD8Q96I13 439 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ASB7Q9H672 318 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 XPNPEP3Q9NQH7 507 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 CFAP74Q9C0B2 1584 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TBKBP1A7MCY6 615 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 ADCY6O43306 1168 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 PROCP04070 461 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 HARS2P49590 506 aaKnown RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 NR1H2P55055 460 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 KCNT1Q5JUK3 1230 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 IZUMO2Q6UXV1 221 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 C2orf69Q8N8R5 385 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.13□□□□□ -1.91
LPP-221ENST00000618621 SLC35C1Q96A29 364 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 GORASP1Q9BQQ3 440 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 IL22Q9GZX6 179 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RETREG1Q9H6L5 497 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 TMEM134Q9H6X4 195 aa3.13□□□□□ -1.91
LPP-221ENST00000618621 RBM22Q9NW64 420 aaKnown RBP eCLIP3.13□□□□□ -1.91
LPP-221ENST00000618621 SMCO3A2RU48 225 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 PSMD12O00232 456 aaPredicted RBP3.12□□□□□ -1.91
LPP-221ENST00000618621 SLC2A4P14672 509 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 CES1P23141 567 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 NOP9Q86U38 636 aaKnown RBP3.12□□□□□ -1.91
LPP-221ENST00000618621 SLC25A41Q8N5S1 370 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ACTL9Q8TC94 416 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ZNF606Q8WXB4 792 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 AHSPQ9NZD4 102 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 F8W810 466 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 NFIBO00712 420 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 WDR47O94967 919 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 TNFAIP8O95379 198 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 CRTAMO95727 393 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 RPLP2P05387 115 aaKnown RBP3.12□□□□□ -1.91
LPP-221ENST00000618621 ZSCAN5DPP0CG00 497 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 RALBP11234 206 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 CHRM3P20309 590 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 EIF2B2P49770 351 aaKnown RBP3.12□□□□□ -1.91
LPP-221ENST00000618621 CXCL9Q07325 125 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 DCTN2Q13561 401 aaKnown RBP3.12□□□□□ -1.91
LPP-221ENST00000618621 NT5DC4Q86YG4 428 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 C19orf18Q8NEA5 215 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 TSPAN14Q8NG11 270 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 PHF21AQ96BD5 680 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 SLITRK1Q96PX8 696 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ITGA11Q9UKX5 1188 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 CAB39Q9Y376 341 aaPredicted RBP3.12□□□□□ -1.91
LPP-221ENST00000618621 PCDHA11Q9Y5I1 949 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ZDBF2Q9HCK1 2354 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ADCY10Q96PN6 1610 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ZNF839A8K0R7 811 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 C2CD2LO14523 706 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 NEMP1O14524 444 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 OGTO15294 1046 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 MAGEC1O60732 1142 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ZNF135P52742 658 aaPredicted RBP3.12□□□□□ -1.91
LPP-221ENST00000618621 BTKQ06187 659 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 CNTN1Q12860 1018 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 MMRN1Q13201 1228 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 AARS2Q5JTZ9 985 aaKnown RBP3.12□□□□□ -1.91
LPP-221ENST00000618621 LPCAT2Q7L5N7 544 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 KCNK18Q7Z418 384 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ETNPPLQ8TBG4 499 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 ARL8BQ9NVJ2 186 aa3.12□□□□□ -1.91
LPP-221ENST00000618621 STMN3Q9NZ72 180 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms