RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 PQLC3Q8N755 202 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 NAT8LQ8N9F0 302 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 CFAP61Q8NHU2 1237 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 FBXO27Q8NI29 283 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 PPP1R10Q96QC0 940 aaKnown RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 FAM105AQ9NUU6 356 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 COX16Q9P0S2 106 aa16.99■□□□□ 0.31
CNOT3-208ENST00000613073 RPL26L1Q9UNX3 145 aaKnown RBP16.99■□□□□ 0.31
CNOT3-208ENST00000613073 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.98■□□□□ 0.31
CNOT3-208ENST00000613073 BCAR1P56945 870 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 DSG1Q02413 1049 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 ADIGQ0VDE8 80 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 SEPT7Q16181 437 aaKnown RBP16.98■□□□□ 0.31
CNOT3-208ENST00000613073 LRRC6Q86X45 466 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 ARHGAP18Q8N392 663 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 GSTCDQ8NEC7 633 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 SNRNP27Q8WVK2 155 aaKnown RBP16.98■□□□□ 0.31
CNOT3-208ENST00000613073 MPP4Q96JB8 637 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 TNIP3Q96KP6 325 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 TSPYL2Q9H2G4 693 aaPredicted RBP16.98■□□□□ 0.31
CNOT3-208ENST00000613073 EBF3Q9H4W6 596 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 SAR1AQ9NR31 198 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 MIOSQ9NXC5 875 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 EURLQ9NYK6 297 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 XPO7Q9UIA9 1087 aaKnown RBP16.98■□□□□ 0.31
CNOT3-208ENST00000613073 TRPV2Q9Y5S1 764 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 APOL1O14791 398 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 ALOX15BO15296 676 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 KCNN4O15554 427 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 CYBAP13498 195 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 DESP17661 470 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 SSTR1P30872 391 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 NDUFV1P49821 464 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 GJA9P57773 515 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 NR1H3Q13133 447 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 PDK2Q15119 407 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 DBN1Q16643 649 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 MARK2Q7KZI7 788 aaKnown RBP16.98■□□□□ 0.31
CNOT3-208ENST00000613073 SLC26A9Q7LBE3 791 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 PCGF5Q86SE9 256 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 SATL1Q86VE3 508 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 ZDHHC17Q8IUH5 632 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 PTCD3Q96EY7 689 aaKnown RBP16.98■□□□□ 0.31
CNOT3-208ENST00000613073 ZNF212Q9UDV6 495 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 ACTL7BQ9Y614 415 aa16.98■□□□□ 0.31
CNOT3-208ENST00000613073 TCEA3O75764 348 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 KRT4P19013 534 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 CLCNKBP51801 687 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 BBS9Q3SYG4 887 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 KIAA0319Q5VV43 1072 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 CCDC185Q8N715 623 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 TBCBQ99426 244 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 PAAF1Q9BRP4 392 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 MED10Q9BTT4 135 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 AGO3Q9H9G7 860 aaKnown RBP16.97■□□□□ 0.31
CNOT3-208ENST00000613073 BLOC1S6Q9UL45 172 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 H3BRJ5 948 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 STK10O94804 968 aaKnown RBP16.97■□□□□ 0.31
CNOT3-208ENST00000613073 ZWINTO95229 277 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 PTPN1P18031 435 aaKnown RBP16.97■□□□□ 0.31
CNOT3-208ENST00000613073 RBL1P28749 1068 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 GRIA2P42262 883 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 FAXCQ5TGI0 409 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 MFSD14CQ5VZR4 134 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 FAM131BQ86XD5 332 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 PYROXD1Q8WU10 500 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 NAT14Q8WUY8 206 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 TTC25Q96NG3 672 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 ECSITQ9BQ95 431 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 TMCO1Q9UM00 188 aa16.97■□□□□ 0.31
CNOT3-208ENST00000613073 CASTOR2A6NHX0 329 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 ANPEPP15144 967 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 ARFIP2P53365 341 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 ARL4CP56559 192 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 GPX6P59796 221 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 PITX1P78337 314 aaPredicted RBP16.96■□□□□ 0.31
CNOT3-208ENST00000613073 CDC16Q13042 620 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 GSTA3Q16772 222 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 PYROXD2Q8N2H3 581 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 SENP8Q96LD8 212 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 NR1H4Q96RI1 486 aaPredicted RBP16.96■□□□□ 0.31
CNOT3-208ENST00000613073 CYLDQ9NQC7 956 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 COMMD3-BMI1R4GMX3 469 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 PGM3O95394 542 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 ABHD2P08910 425 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 VAV1P15498 845 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 WARSP23381 471 aaKnown RBP16.96■□□□□ 0.31
CNOT3-208ENST00000613073 CYP2F1P24903 491 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 LRPAP1P30533 357 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 THPOP40225 353 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 MAGEA8P43361 318 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 SCNN1GP51170 649 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 MAP3K7CLP57077 242 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 PRKCZQ05513 592 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 SREBF2Q12772 1141 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 EFTUD2Q15029 972 aaKnown RBP eCLIP16.96■□□□□ 0.311e-6■■■■■ 29.5
CNOT3-208ENST00000613073 PAN2Q504Q3 1202 aaKnown RBP16.96■□□□□ 0.31
CNOT3-208ENST00000613073 DCAF6Q58WW2 860 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 PAQR9Q6ZVX9 377 aa16.96■□□□□ 0.31
CNOT3-208ENST00000613073 LIMS2Q7Z4I7 341 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms