RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 MANEALQ5VSG8 457 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 GET4Q7L5D6 327 aaPredicted RBP16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 ANKS1BQ7Z6G8 1248 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 CREG2Q8IUH2 290 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 DENND1CQ8IV53 801 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 ZNF683Q8IZ20 524 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 ACTRT1Q8TDG2 376 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 MYADMQ96S97 322 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 PSMB7Q99436 277 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 DDX50Q9BQ39 737 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 SMG9Q9H0W8 520 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 POMKQ9H5K3 350 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 KLHL11Q9NVR0 708 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 CWC15Q9P013 229 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 CFAP97Q9P2B7 532 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 PPARGC1AQ9UBK2 798 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 LSM7Q9UK45 103 aaKnown RBP16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 CCL26Q9Y258 94 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 SH3BP1Q9Y3L3 701 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 XIRP2A4UGR9 3374 aa16.51■□□□□ 0.23
CLTCL1-207ENST00000611723 IGLV3-10A0A075B6K4 115 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 DRGXA6NNA5 263 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 FAM72CH0Y354 149 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 H3BRJ5 948 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 GFRA2O00451 464 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 LRIG2O94898 1065 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 PRAMEF12O95522 483 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 MOCS2O96007 188 aaPredicted RBP16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 IRF1P10914 325 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 ARL4AP40617 200 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 USP4Q13107 963 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 AUHQ13825 339 aaKnown RBP16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 FAM133BQ5BKY9 247 aaKnown RBP16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 TFDP3Q5H9I0 405 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 FAM78AQ5JUQ0 283 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 SEL1L2Q5TEA6 688 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 FAM72AQ5TYM5 149 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 NADSYN1Q6IA69 706 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 FAM72DQ6L9T8 149 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 C14orf80Q86SX3 495 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 FAM72BQ86X60 149 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 E2F7Q96AV8 911 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 RNF157Q96PX1 679 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 EPAS1Q99814 870 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 OSBPL8Q9BZF1 889 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 SIK2Q9H0K1 926 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 RETREG1Q9H6L5 497 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 CDC23Q9UJX2 597 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 SNX10Q9Y5X0 201 aa16.5■□□□□ 0.23
CLTCL1-207ENST00000611723 HELZP42694 1942 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 hCG_1818297A0A087WSY0 165 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 GRXCR2A6NFK2 248 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 E9PAM4 449 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 H3BQ06 376 aaPredicted RBP16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 ZNF185O15231 689 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 MBTPS2O43462 519 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 CEP104O60308 925 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 URI1O94763 535 aaPredicted RBP16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 LAMP2P13473 410 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 TACR2P21452 398 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 KCNA5P22460 613 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 CLUL1Q15846 466 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 ANKRD20A8PQ5CZ79 823 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 PPP6R3Q5H9R7 873 aaPredicted RBP16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 DNTTIP2Q5QJE6 756 aaKnown RBP16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 FBXL22Q6P050 247 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 AADACL2Q6P093 401 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 SLC13A5Q86YT5 568 aaPredicted RBP16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 CPXM2Q8N436 756 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 PCDH19Q8TAB3 1148 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 RIN3Q8TB24 985 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 NUP210Q8TEM1 1887 aaPredicted RBP16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 CSPG4P5Q96PW8 444 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 TBC1D14Q9P2M4 693 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 EPS15L1Q9UBC2 864 aa16.49■□□□□ 0.23
CLTCL1-207ENST00000611723 GOLGA6L7A0A1B0GV03 622 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 WASH4PA8MWX3 477 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 EEF2KO00418 725 aaKnown RBP16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 GOT1P17174 413 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 SLC6A4P31645 630 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 CHKAP35790 457 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 MMRN1Q13201 1228 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 DPYSQ14117 519 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 LEXMQ3ZCV2 418 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 RAP1GAP2Q684P5 730 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 LRRC31Q6UY01 552 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 RFX8Q6ZV50 586 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 OTOP3Q7RTS5 596 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 CCDC50Q8IVM0 306 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 PQLC3Q8N755 202 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 OTUB2Q96DC9 234 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 TBC1D31Q96DN5 1066 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 LRRC3BQ96PB8 259 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 CALN1Q9BXU9 219 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 MAK16Q9BXY0 300 aaKnown RBP16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 ZFP14Q9HCL3 533 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 STIM2Q9P246 746 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 NEU3Q9UQ49 428 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 MRFAP1Q9Y605 127 aa16.48■□□□□ 0.23
CLTCL1-207ENST00000611723 DENND4AQ7Z401 1863 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms