RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 PRUNE1Q86TP1 453 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 TDHQ8IZJ6 230 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 PDZD8Q8NEN9 1154 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 OVCA2Q8WZ82 227 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 WBP2Q969T9 261 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 RNF38Q9H0F5 515 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 EPN3Q9H201 632 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 LRRC19Q9H756 370 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 TRPM5Q9NZQ8 1165 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 EFR3BQ9Y2G0 817 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 HCFC2Q9Y5Z7 792 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 TRANK1O15050 2925 aa17.92■□□□□ 0.46
PPFIA3-207ENST00000602716 LIASO43766 372 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 LPXNO60711 386 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 CPP00450 1065 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 OAS1P00973 400 aaKnown RBP17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 IGLV3-27P01718 113 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 MYZAPP0CAP1 466 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 CCR1P32246 355 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 MDH1P40925 334 aaKnown RBP17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 CCR2P41597 374 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 GBE1Q04446 702 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 DPYSQ14117 519 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 TRIP4Q15650 581 aaPredicted RBP17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 PIK3R6Q5UE93 754 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 NCBP2-AS2Q69YL0 99 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 TADA2BQ86TJ2 420 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 PSTKQ8IV42 348 aaKnown RBP17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 MAP7D3Q8IWC1 876 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 TP53INP2Q8IXH6 220 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 SIK2Q9H0K1 926 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 SLC28A3Q9HAS3 691 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 LRIG2O94898 1065 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 GABRR2P28476 465 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 CHRNA3P32297 505 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 PPP2R5DQ14738 602 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 BRMS1LQ5PSV4 323 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 PPM1LQ5SGD2 360 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 HECTD3Q5T447 861 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 TXNDC8Q6A555 127 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 RFX8Q6ZV50 586 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 C14orf80Q86SX3 495 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 JAMLQ86YT9 394 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 VN1R2Q8NFZ6 395 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 CORO1BQ9BR76 489 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 FAM114A2Q9NRY5 505 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 OLA1Q9NTK5 396 aaKnown RBP17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 HS3ST4Q9Y661 456 aa17.91■□□□□ 0.46
PPFIA3-207ENST00000602716 ATXN2Q99700 1313 aaKnown RBP17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 SRRM3A6NNA2 597 aaPredicted RBP17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 EEF2KO00418 725 aaKnown RBP17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 APOL1O14791 398 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 MFSD11O43934 449 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 AIF1P55008 147 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 DR1Q01658 176 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 SLC10A2Q12908 348 aaPredicted RBP17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 ARL13BQ3SXY8 428 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 CHRDL2Q6WN34 429 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 TMC3Q7Z5M5 1100 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 ITIH5Q86UX2 942 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 GLIS1Q8NBF1 620 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 OR2W6PQ8NHA6 318 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 SLC35B2Q8TB61 432 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 MAIP1Q8WWC4 291 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 CYP2S1Q96SQ9 504 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 TRPC7Q9HCX4 862 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 GKN1Q9NS71 199 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 SMPD4Q9NXE4 827 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 OR12D3Q9UGF7 316 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 PCYOX1Q9UHG3 505 aa17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 UTP11Q9Y3A2 253 aaKnown RBP17.9■□□□□ 0.46
PPFIA3-207ENST00000602716 A0A1W2PRU2 124 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 APOC4-APOC2K7ER74 178 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 SCAMP3O14828 347 aaKnown RBP17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 APOC2P02655 101 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 BMP8BP34820 402 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 ARL4AP40617 200 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 FNTAP49354 379 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 NRLP54845 237 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 NTHL1P78549 312 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 OASLQ15646 514 aaKnown RBP17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 CCNG2Q16589 344 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 TTC31Q49AM3 519 aaPredicted RBP17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 PACS2Q86VP3 889 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 VSIG1Q86XK7 387 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 CCDC105Q8IYK2 499 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 TCEAL4Q96EI5 215 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 MYEOVQ96EZ4 313 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 ZFRQ96KR1 1074 aaKnown RBP17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 MAK16Q9BXY0 300 aaKnown RBP17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 HEY1Q9Y5J3 304 aa17.89■□□□□ 0.46
PPFIA3-207ENST00000602716 OBSL1O75147 1896 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 ZNF487B1APH4 448 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 H3BRJ5 948 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 MYL4P12829 197 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 ATP5C1P36542 298 aaKnown RBP17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 NRIP1P48552 1158 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 TPI1P60174 286 aa17.89■□□□□ 0.45
PPFIA3-207ENST00000602716 ZXDBP98169 803 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms