RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 FAM72BQ86X60 149 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 DENND1CQ8IV53 801 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 KLHL7Q8IXQ5 586 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 MICALL1Q8N3F8 863 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 MMGT1Q8N4V1 131 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 PQLC3Q8N755 202 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 PRELID2Q8N945 189 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 CCDC26Q8TAB7 109 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 P3H4Q92791 437 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 MAGOHBQ96A72 148 aaKnown RBP15.95■□□□□ 0.14
UPF1-206ENST00000598471 ZFRQ96KR1 1074 aaKnown RBP15.95■□□□□ 0.14
UPF1-206ENST00000598471 MAGEB5Q9BZ81 275 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 XPO7Q9UIA9 1087 aaKnown RBP15.95■□□□□ 0.14
UPF1-206ENST00000598471 SNX10Q9Y5X0 201 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 ANAPC1Q9H1A4 1944 aa15.95■□□□□ 0.14
UPF1-206ENST00000598471 MCF2LO15068 1137 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 TACR2P21452 398 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 AMPD1P23109 780 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 HOXC13P31276 330 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 GGCXP38435 758 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 NR2C2P49116 596 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 AUHQ13825 339 aaKnown RBP15.94■□□□□ 0.14
UPF1-206ENST00000598471 RABGAP1LQ5R372 815 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 ATAT1Q5SQI0 421 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 TEX35Q5T0J7 233 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 MANEALQ5VSG8 457 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 C8orf74Q6P047 294 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 GRK7Q8WTQ7 553 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 C1orf54Q8WWF1 131 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 ING5Q8WYH8 240 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 UBXN4Q92575 508 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 HAUS1Q96CS2 278 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 RIPOR3Q96MK2 946 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 KRT12Q99456 494 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 ADAM7Q9H2U9 754 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 LRRC19Q9H756 370 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 CLDND1Q9NY35 253 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 CFAP97Q9P2B7 532 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 PPARGC1AQ9UBK2 798 aaKnown RBP15.94■□□□□ 0.14
UPF1-206ENST00000598471 FEZ2Q9UHY8 353 aaPredicted RBP15.94■□□□□ 0.14
UPF1-206ENST00000598471 VANGL2Q9ULK5 521 aa15.94■□□□□ 0.14
UPF1-206ENST00000598471 LEFTY2O00292 366 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 DCLK1O15075 740 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 ERCC2P18074 760 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 OTUD4Q01804 1114 aaKnown RBP15.93■□□□□ 0.14
UPF1-206ENST00000598471 LMNB2Q03252 620 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 ADCY2Q08462 1091 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 GLE1Q53GS7 698 aaKnown RBP15.93■□□□□ 0.14
UPF1-206ENST00000598471 ADGRF1Q5T601 910 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 NCBP2-AS2Q69YL0 99 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 DRICH1Q6PGQ1 229 aaPredicted RBP15.93■□□□□ 0.14
UPF1-206ENST00000598471 SYCE2Q6PIF2 218 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 C1orf228Q6PIY5 440 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 EP400NLQ6ZTU2 488 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 MAATS1Q7Z4T9 603 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 LZTR1Q8N653 840 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 PLD5Q8N7P1 536 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 MYRIPQ8NFW9 859 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 ITFG1Q8TB96 612 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 ACTL9Q8TC94 416 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 RPRD1AQ96P16 312 aaPredicted RBP15.93■□□□□ 0.14
UPF1-206ENST00000598471 APOL5Q9BWW9 433 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 ZYG11BQ9C0D3 744 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 DDX47Q9H0S4 455 aaKnown RBP15.93■□□□□ 0.14
UPF1-206ENST00000598471 RETREG1Q9H6L5 497 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 KIF9Q9HAQ2 790 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 TDP1Q9NUW8 608 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 AGO1Q9UL18 857 aaKnown RBP15.93■□□□□ 0.14
UPF1-206ENST00000598471 NR2E1Q9Y466 385 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 HEY1Q9Y5J3 304 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 RAD54BQ9Y620 910 aa15.93■□□□□ 0.14
UPF1-206ENST00000598471 DENND4CQ5VZ89 1909 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 IGLV3-10A0A075B6K4 115 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 E2F8A0AVK6 867 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 TYW5A2RUC4 315 aaKnown RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 NRG2O14511 850 aaPredicted RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 LIASO43766 372 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 ZNF189O75820 626 aaPredicted RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 RHOQP17081 205 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 WEE1P30291 646 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 COILP38432 576 aaPredicted RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 EIF3EP60228 445 aaKnown RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 DHX34Q14147 1143 aaKnown RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 PAFAH1B3Q15102 231 aaKnown RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 NOMO1Q15155 1222 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 CTC1Q2NKJ3 1217 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 TTC39BQ5VTQ0 682 aaPredicted RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 NADSYN1Q6IA69 706 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 FBXL22Q6P050 247 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 CCDC137Q6PK04 289 aaKnown RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 HTR3DQ70Z44 454 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 GET4Q7L5D6 327 aaPredicted RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 C14orf80Q86SX3 495 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 CCDC105Q8IYK2 499 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 ZDHHC14Q8IZN3 488 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 LGI2Q8N0V4 545 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 NOA1Q8NC60 698 aaKnown RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 TTC16Q8NEE8 873 aa15.92■□□□□ 0.14
UPF1-206ENST00000598471 MAFAQ8NHW3 353 aaPredicted RBP15.92■□□□□ 0.14
UPF1-206ENST00000598471 SH3RF2Q8TEC5 729 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms