RNA–Protein interactions for RNA: ENST00000598020.3

PNKP-211, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-211ENST00000598020 PSMA2P25787 234 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 GRIA2P42262 883 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 MRE11P49959 708 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 AIF1P55008 147 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 SCAPQ12770 1279 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 AUHQ13825 339 aaKnown RBP21.03■□□□□ 0.96
PNKP-211ENST00000598020 LRRC32Q14392 662 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 FBXO43Q4G163 708 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 NAT16Q8N8M0 369 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 ZNF557Q8N988 423 aaPredicted RBP21.03■□□□□ 0.96
PNKP-211ENST00000598020 EIF3CQ99613 913 aaKnown RBP21.03■□□□□ 0.96
PNKP-211ENST00000598020 BAG1Q99933 345 aaPredicted RBP21.03■□□□□ 0.96
PNKP-211ENST00000598020 PLK2Q9NYY3 685 aa21.03■□□□□ 0.96
PNKP-211ENST00000598020 EPN1Q9Y6I3 576 aaPredicted RBP21.03■□□□□ 0.96
PNKP-211ENST00000598020 ZNF318Q5VUA4 2279 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 TYW5A2RUC4 315 aaKnown RBP21.02■□□□□ 0.96
PNKP-211ENST00000598020 KAT7O95251 611 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 APODP05090 189 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 AVPR2P30518 371 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 SGSHP51688 502 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 NRG1Q02297 640 aaPredicted RBP21.02■□□□□ 0.96
PNKP-211ENST00000598020 TCEAL1Q15170 157 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 TTC39BQ5VTQ0 682 aaPredicted RBP21.02■□□□□ 0.96
PNKP-211ENST00000598020 GRAMD4Q6IC98 578 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 FBXL22Q6P050 247 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 LGI2Q8N0V4 545 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 NIPA2Q8N8Q9 360 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 TMEM105Q8N8V8 129 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 CCDC26Q8TAB7 109 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 BHMTQ93088 406 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 MYEOVQ96EZ4 313 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 IER2Q9BTL4 223 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 OSBPL2Q9H1P3 480 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 LMAN1LQ9HAT1 526 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 ARHGEF4Q9NR80 690 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 DNAJC17Q9NVM6 304 aaKnown RBP21.02■□□□□ 0.96
PNKP-211ENST00000598020 LCMT1Q9UIC8 334 aa21.02■□□□□ 0.96
PNKP-211ENST00000598020 SOWAHDA6NJG2 315 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 TBL1XO60907 577 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 RNF8O76064 485 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 NDUFA10O95299 355 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 EGFP01133 1207 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 MAGEA1P43355 309 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 DGKGP49619 791 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 RPS24P62847 133 aaKnown RBP21.01■□□□□ 0.95
PNKP-211ENST00000598020 MESP2Q0VG99 397 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 PIGHQ14442 188 aaPredicted RBP21.01■□□□□ 0.95
PNKP-211ENST00000598020 SPA17Q15506 151 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 MAMSTRQ6ZN01 415 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 ZNF683Q8IZ20 524 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 ARFGAP1Q8N6T3 406 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 TERB1Q8NA31 727 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 ZNF564Q8TBZ8 553 aaPredicted RBP21.01■□□□□ 0.95
PNKP-211ENST00000598020 EZH1Q92800 747 aaPredicted RBP21.01■□□□□ 0.95
PNKP-211ENST00000598020 CHRDQ9H2X0 955 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 IP6K2Q9UHH9 426 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 CLEC4EQ9ULY5 219 aa21.01■□□□□ 0.95
PNKP-211ENST00000598020 IGLV3-10A0A075B6K4 115 aa21■□□□□ 0.95
PNKP-211ENST00000598020 DRGXA6NNA5 263 aa21■□□□□ 0.95
PNKP-211ENST00000598020 K7EQS6 105 aa21■□□□□ 0.95
PNKP-211ENST00000598020 MYO1FO00160 1098 aa21■□□□□ 0.95
PNKP-211ENST00000598020 MTA2O94776 668 aa21■□□□□ 0.95
PNKP-211ENST00000598020 PCK1P35558 622 aa21■□□□□ 0.95
PNKP-211ENST00000598020 TNFRSF4P43489 277 aa21■□□□□ 0.95
PNKP-211ENST00000598020 NUBP1P53384 320 aa21■□□□□ 0.95
PNKP-211ENST00000598020 RABGAP1LQ5R372 815 aa21■□□□□ 0.95
PNKP-211ENST00000598020 ARTNQ5T4W7 220 aa21■□□□□ 0.95
PNKP-211ENST00000598020 RAD9BQ6WBX8 426 aa21■□□□□ 0.95
PNKP-211ENST00000598020 NUDT18Q6ZVK8 323 aa21■□□□□ 0.95
PNKP-211ENST00000598020 SLFN11Q7Z7L1 901 aa21■□□□□ 0.95
PNKP-211ENST00000598020 RHOT2Q8IXI1 618 aa21■□□□□ 0.95
PNKP-211ENST00000598020 CCDC185Q8N715 623 aa21■□□□□ 0.95
PNKP-211ENST00000598020 DDX51Q8N8A6 666 aaKnown RBP eCLIP21■□□□□ 0.95
PNKP-211ENST00000598020 FIBINQ8TAL6 211 aa21■□□□□ 0.95
PNKP-211ENST00000598020 SIK2Q9H0K1 926 aa21■□□□□ 0.95
PNKP-211ENST00000598020 LUC7LQ9NQ29 371 aaKnown RBP21■□□□□ 0.95
PNKP-211ENST00000598020 TMPRSS4Q9NRS4 437 aa21■□□□□ 0.95
PNKP-211ENST00000598020 CTTNBP2NLQ9P2B4 639 aa21■□□□□ 0.95
PNKP-211ENST00000598020 ANAPC7Q9UJX3 599 aa21■□□□□ 0.95
PNKP-211ENST00000598020 PCDHA13Q9Y5I0 950 aa21■□□□□ 0.95
PNKP-211ENST00000598020 KMT2EQ8IZD2 1858 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 TRIM24O15164 1050 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 LRCH4O75427 683 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 DCNP07585 359 aaKnown RBP20.99■□□□□ 0.95
PNKP-211ENST00000598020 LRRC31Q6UY01 552 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 KIAA0907Q7Z7F0 614 aaPredicted RBP20.99■□□□□ 0.95
PNKP-211ENST00000598020 C14orf80Q86SX3 495 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 KCNV2Q8TDN2 545 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 RFFLQ8WZ73 363 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 IGSF8Q969P0 613 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 RPRD1AQ96P16 312 aaPredicted RBP20.99■□□□□ 0.95
PNKP-211ENST00000598020 VANGL2Q9ULK5 521 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 STARD13Q9Y3M8 1113 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 DOCK4Q8N1I0 1966 aa20.99■□□□□ 0.95
PNKP-211ENST00000598020 MYO18AQ92614 2054 aaKnown RBP20.98■□□□□ 0.95
PNKP-211ENST00000598020 A0A1B0GVM2 712 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 TBC1D3BA6NDS4 549 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 TCAF2A6NFQ2 919 aa20.98■□□□□ 0.95
PNKP-211ENST00000598020 LUC7L3O95232 432 aaKnown RBP20.98■□□□□ 0.95
PNKP-211ENST00000598020 CHRM1P11229 460 aaPredicted RBP20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms