RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 MMRN2Q9H8L6 949 aa17.16■□□□□ 0.34
SHKBP1-215ENST00000597649 ABCB8Q9NUT2 735 aa17.16■□□□□ 0.34
SHKBP1-215ENST00000597649 TMEM63CQ9P1W3 806 aa17.16■□□□□ 0.34
SHKBP1-215ENST00000597649 STOML2Q9UJZ1 356 aa17.16■□□□□ 0.34
SHKBP1-215ENST00000597649 MAPK8IP1Q9UQF2 711 aa17.16■□□□□ 0.34
SHKBP1-215ENST00000597649 LETM1O95202 739 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 ZBED1O96006 694 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 IGHV4-34P06331 123 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 PPP1R2P41236 205 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 MORC3Q14149 939 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 ARHGAP17Q68EM7 881 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 SASS6Q6UVJ0 657 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 ANKRD52Q8NB46 1076 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 WFDC5Q8TCV5 224 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 TMA16Q96EY4 203 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 TMEM176AQ96HP8 235 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 IMPG2Q9BZV3 1241 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 EBF2Q9HAK2 575 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 CISHQ9NSE2 258 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 SFMBT1Q9UHJ3 866 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 TMEM131Q92545 1883 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 PTPRQQ9UMZ3 2332 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 TENM4Q6N022 2769 aa17.15■□□□□ 0.34
SHKBP1-215ENST00000597649 ZNF462Q96JM2 2506 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 CBX4O00257 560 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 PLK4O00444 970 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 CALUO43852 315 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 PRB1P04280 392 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 CCT8P50990 548 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 MCCD1P59942 119 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 MBLAC2Q68D91 279 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 INTS8Q75QN2 995 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 SMYD4Q8IYR2 804 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 GUF1Q8N442 669 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 ADAM32Q8TC27 787 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 WFIKKN2Q8TEU8 576 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 EDEM1Q92611 657 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 TATDN2Q93075 761 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 TMEM8AQ9HCN3 771 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 GGA2Q9UJY4 613 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 ATMQ13315 3056 aa17.14■□□□□ 0.33
SHKBP1-215ENST00000597649 A0A1B0GTQ1 180 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 YJEFN3A6XGL0 299 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 E7ENQ6 273 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 PAPSS1O43252 624 aaPredicted RBP17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 DNTTP04053 509 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 DLDP09622 509 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 PABPC1P11940 636 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 NR2F2P24468 414 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 ITPKBP27987 946 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 CD70P32970 193 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 PRCPP42785 496 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 HARS2P49590 506 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 ZBTB16Q05516 673 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 PDE4CQ08493 712 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 SHBQ15464 509 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 NFIL3Q16649 462 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 ADGRF1Q5T601 910 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 GATAD2AQ86YP4 633 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 FAM186BQ8IYM0 893 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 MYO19Q96H55 970 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 LMLNQ96KR4 655 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 SGK2Q9HBY8 427 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 SERGEFQ9UGK8 458 aa17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 HBS1LQ9Y450 684 aaKnown RBP17.13■□□□□ 0.33
SHKBP1-215ENST00000597649 GOLGA6L7A0A1B0GV03 622 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 EIF4E1BA6NMX2 242 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 PSMA7O14818 248 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 WNT9AO14904 365 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 VILLO15195 856 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 MSI1O43347 362 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 WNT1P04628 370 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 BCAT1P54687 386 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 BSPRYQ5W0U4 402 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 KIAA0895LQ68EN5 471 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 RFWD3Q6PCD5 774 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 RBM43Q6ZSC3 357 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 TMPRSS12Q86WS5 348 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 PIP4K2CQ8TBX8 421 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 SLC6A18Q96N87 628 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 TSG101Q99816 390 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 FBRSQ9HAH7 460 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 FTSJ1Q9UET6 329 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 DACH1Q9UI36 760 aa17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 MUC22E2RYF6 1773 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-215ENST00000597649 C10orf142B7Z368 130 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 TLX3O43711 291 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 GABBR2O75899 941 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 C1QL1O75973 258 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 KRT13P13646 458 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 GALCP54803 685 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 RACK1P63244 317 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 ENPEPQ07075 957 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 DNAJC3Q13217 504 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 GOLGA7BQ2TAP0 167 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 COBLL1Q53SF7 1204 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 PIK3R6Q5UE93 754 aa17.11■□□□□ 0.33
SHKBP1-215ENST00000597649 ZNF776Q68DI1 518 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms