RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 RFC1P35251 1148 aaPredicted RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 EIF4A3P38919 411 aaKnown RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 WASP42768 502 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 TNFRSF4P43489 277 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 CCR3P51677 355 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 ZNF75DP51815 510 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 RPS24P62847 133 aaKnown RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 CCDC14Q49A88 953 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 MS4A13Q5J8X5 152 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 CCDC122Q5T0U0 273 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 OTUD1Q5VV17 481 aaPredicted RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 HEATR6Q6AI08 1181 aaKnown RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 PPP1R2P3Q6NXS1 205 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 CIR1Q86X95 450 aaPredicted RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 FAM131BQ86XD5 332 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 CCDC117Q8IWD4 279 aaPredicted RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 DRC7Q8IY82 874 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 PHTF2Q8N3S3 785 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 SPEM1Q8N4L4 309 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 TERB1Q8NA31 727 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 HJURPQ8NCD3 748 aaPredicted RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 C3orf20Q8ND61 904 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 ZNF653Q96CK0 615 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 MYEOVQ96EZ4 313 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 DEF6Q9H4E7 631 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 CNOT8Q9UFF9 292 aaKnown RBP11.48□□□□□ -0.57
LIG1-211ENST00000596457 STOML2Q9UJZ1 356 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 SLC8A2Q9UPR5 921 aa11.48□□□□□ -0.57
LIG1-211ENST00000596457 WDR87Q6ZQQ6 2873 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 A0A087X0T9 212 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 PRR23AA6NEV1 266 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 C2CD4BA6NLJ0 364 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 PRRT4C9JH25 899 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 AKR1B15C9JRZ8 316 aaPredicted RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 H0Y626 953 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 PAGE1O75459 146 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 FAM228BP0C875 321 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 SP9P0CG40 484 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 GZMAP12544 262 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 HOXD9P28356 352 aaPredicted RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 HOXC13P31276 330 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 RDXP35241 583 aaKnown RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 CXCR3P49682 368 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 NUMBP49757 651 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 RPL7AP62424 266 aaKnown RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 EIF4EBP2Q13542 120 aaPredicted RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 PPP2R5DQ14738 602 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 GEN1Q17RS7 908 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 BRMS1LQ5PSV4 323 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 SCYL2Q6P3W7 929 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 MFN1Q8IWA4 741 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 MAML2Q8IZL2 1156 aaPredicted RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 ALLCQ8N6M5 410 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 ZNF513Q8N8E2 541 aaPredicted RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 TXNDC5Q8NBS9 432 aaKnown RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 CCDC26Q8TAB7 109 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 USP33Q8TEY7 942 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 FAM172AQ8WUF8 416 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 NT5C3BQ969T7 300 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 VCPIP1Q96JH7 1222 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 PRICKLE1Q96MT3 831 aaPredicted RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 RPRD1AQ96P16 312 aaPredicted RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 FAM126AQ9BYI3 521 aaPredicted RBP11.47□□□□□ -0.57
LIG1-211ENST00000596457 CIPCQ9C0C6 399 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 ABHD10Q9NUJ1 306 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 PARVAQ9NVD7 372 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 ARHGAP20Q9P2F6 1191 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 VANGL2Q9ULK5 521 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 PAXBP1Q9Y5B6 917 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 HS3ST4Q9Y661 456 aa11.47□□□□□ -0.57
LIG1-211ENST00000596457 MYO15AQ9UKN7 3530 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 DMXL1Q9Y485 3027 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 A0A0A0MRY4 1105 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 CCP110O43303 1012 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 AKR1B10O60218 316 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 SRGAP2O75044 1071 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 MFAP3LO75121 409 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 DESP17661 470 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 PXNP49023 591 aaPredicted RBP11.46□□□□□ -0.57
LIG1-211ENST00000596457 GSCP56915 257 aaPredicted RBP11.46□□□□□ -0.57
LIG1-211ENST00000596457 MRPS21P82921 87 aaKnown RBP11.46□□□□□ -0.57
LIG1-211ENST00000596457 GFPT1Q06210 699 aaPredicted RBP11.46□□□□□ -0.57
LIG1-211ENST00000596457 AUHQ13825 339 aaKnown RBP11.46□□□□□ -0.57
LIG1-211ENST00000596457 DMC1Q14565 340 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 RABGAP1LQ5R372 815 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 EGFLAMQ63HQ2 1017 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 CHST9Q7L1S5 443 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 ARCQ7LC44 396 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 ANKS1BQ7Z6G8 1248 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 C14orf80Q86SX3 495 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 WFDC5Q8TCV5 224 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 IGSF8Q969P0 613 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 ACDQ96AP0 544 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 PGAP3Q96FM1 320 aaPredicted RBP11.46□□□□□ -0.57
LIG1-211ENST00000596457 HHIPQ96QV1 700 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 CHP1Q99653 195 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 SLC2A11Q9BYW1 496 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 ANLNQ9NQW6 1124 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 ABCB8Q9NUT2 735 aa11.46□□□□□ -0.57
LIG1-211ENST00000596457 ARHGEF38Q9NXL2 777 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms