RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 TBL1XO60907 577 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 DKK1O94907 266 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 CALCAP01258 141 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 DNTTP04053 509 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 GRIA4P48058 902 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 FKBP3Q00688 224 aaKnown RBP17.01■□□□□ 0.31
LIG1-205ENST00000593425 COBLL1Q53SF7 1204 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 KCNT1Q5JUK3 1230 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 ZNF658Q5TYW1 1059 aaPredicted RBP17.01■□□□□ 0.31
LIG1-205ENST00000593425 NADSYN1Q6IA69 706 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 PMF1Q6P1K2 205 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 C19orf48Q6RUI8 117 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 TMEM270Q6UE05 265 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 LCLAT1Q6UWP7 414 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 MARCH9Q86YJ5 346 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 ERCC4Q92889 916 aaPredicted RBP17.01■□□□□ 0.31
LIG1-205ENST00000593425 MYEOVQ96EZ4 313 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 LMLNQ96KR4 655 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 PRICKLE1Q96MT3 831 aaPredicted RBP17.01■□□□□ 0.31
LIG1-205ENST00000593425 TSG101Q99816 390 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 ORAI3Q9BRQ5 295 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 CCDC86Q9H6F5 360 aaKnown RBP17.01■□□□□ 0.31
LIG1-205ENST00000593425 FBRSQ9HAH7 460 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 OSGEPQ9NPF4 335 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 RMND1Q9NWS8 449 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.01■□□□□ 0.31
LIG1-205ENST00000593425 ANKRD6Q9Y2G4 727 aa17.01■□□□□ 0.31
LIG1-205ENST00000593425 GOLGA8CPA6NN73 597 aa17■□□□□ 0.31
LIG1-205ENST00000593425 RNF225M0QZC1 329 aaPredicted RBP17■□□□□ 0.31
LIG1-205ENST00000593425 ACSL4O60488 711 aa17■□□□□ 0.31
LIG1-205ENST00000593425 FSBPO95073 299 aa17■□□□□ 0.31
LIG1-205ENST00000593425 POLR2EP19388 210 aaKnown RBP17■□□□□ 0.31
LIG1-205ENST00000593425 TBXAS1P24557 533 aaPredicted RBP17■□□□□ 0.31
LIG1-205ENST00000593425 BRD2P25440 801 aaKnown RBP17■□□□□ 0.31
LIG1-205ENST00000593425 ZBTB16Q05516 673 aa17■□□□□ 0.31
LIG1-205ENST00000593425 TTC31Q49AM3 519 aaPredicted RBP17■□□□□ 0.31
LIG1-205ENST00000593425 TMPRSS7Q7RTY8 843 aa17■□□□□ 0.31
LIG1-205ENST00000593425 IRGQQ8WZA9 623 aa17■□□□□ 0.31
LIG1-205ENST00000593425 KAT5Q92993 513 aa17■□□□□ 0.31
LIG1-205ENST00000593425 STIM2Q9P246 746 aa17■□□□□ 0.31
LIG1-205ENST00000593425 ARMCX3Q9UH62 379 aaPredicted RBP17■□□□□ 0.31
LIG1-205ENST00000593425 KIAA1257Q9ULG3 409 aa17■□□□□ 0.31
LIG1-205ENST00000593425 FREM2Q5SZK8 3169 aa17■□□□□ 0.31
LIG1-205ENST00000593425 H0Y8X5 98 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 M0QYV0 167 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 LTFP02788 710 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 IGHV4-34P06331 123 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 ATP5BP06576 529 aaKnown RBP16.99■□□□□ 0.31
LIG1-205ENST00000593425 PAEPP09466 180 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 CD27P26842 260 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 FMO5P49326 533 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 TBX4P57082 545 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 TEAD4Q15561 434 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 MPP7Q5T2T1 576 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 NUGGCQ68CJ6 796 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 ZNF776Q68DI1 518 aaPredicted RBP16.99■□□□□ 0.31
LIG1-205ENST00000593425 MFN1Q8IWA4 741 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 UNC45BQ8IWX7 931 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 FMR1NBQ8N0W7 255 aaPredicted RBP16.99■□□□□ 0.31
LIG1-205ENST00000593425 CCDC34Q96HJ3 373 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 CDC6Q99741 560 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 RSPH9Q9H1X1 276 aaPredicted RBP16.99■□□□□ 0.31
LIG1-205ENST00000593425 SGK2Q9HBY8 427 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 SERGEFQ9UGK8 458 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 SUN2Q9UH99 717 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 INTS6Q9UL03 887 aaKnown RBP16.99■□□□□ 0.31
LIG1-205ENST00000593425 PCDHB4Q9Y5E5 795 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 ATP6V1DQ9Y5K8 247 aa16.99■□□□□ 0.31
LIG1-205ENST00000593425 IRAK2O43187 625 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 SIN3BO75182 1162 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 FYNP06241 537 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 SLC11A2P49281 568 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 CCT8P50990 548 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 IL9RQ01113 521 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 LRRC63Q05C16 580 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 SUZ12Q15022 739 aaKnown RBP16.98■□□□□ 0.31
LIG1-205ENST00000593425 COL28A1Q2UY09 1125 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 HJURPQ8NCD3 748 aaPredicted RBP16.98■□□□□ 0.31
LIG1-205ENST00000593425 FIBINQ8TAL6 211 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 GOLGA1Q92805 767 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 IGSF8Q969P0 613 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 TTC17Q96AE7 1141 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 FCRL2Q96LA5 508 aaPredicted RBP16.98■□□□□ 0.31
LIG1-205ENST00000593425 MRGPRX3Q96LB0 322 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 NT5C1BQ96P26 610 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 GSDMAQ96QA5 445 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 IRX2Q9BZI1 471 aaPredicted RBP16.98■□□□□ 0.31
LIG1-205ENST00000593425 MIS12Q9H081 205 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 PABPC3Q9H361 631 aaKnown RBP16.98■□□□□ 0.31
LIG1-205ENST00000593425 ZFYVE26Q68DK2 2539 aa16.98■□□□□ 0.31
LIG1-205ENST00000593425 CSKP41240 450 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 CTSKP43235 329 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 RPS24P62847 133 aaKnown RBP16.97■□□□□ 0.31
LIG1-205ENST00000593425 CNGA2Q16280 664 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 FSCBQ5H9T9 825 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 KIAA0895LQ68EN5 471 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 MMS22LQ6ZRQ5 1243 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 DHX40Q8IX18 779 aaKnown RBP16.97■□□□□ 0.31
LIG1-205ENST00000593425 PPM1KQ8N3J5 372 aa16.97■□□□□ 0.31
LIG1-205ENST00000593425 SPATA20Q8TB22 786 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms